Sceloporus undulatus (fence lizard): 121931971
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Entry
121931971 CDS
T07740
Symbol
POLR1B
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121931971 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sund03021
]
121931971 (POLR1B)
Enzymes [BR:
sund01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121931971 (POLR1B)
Transcription machinery [BR:
sund03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
121931971 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
121931971
NCBI-ProteinID:
XP_042326095
LinkDB
All DBs
Position
1:24265919..24293310
Genome browser
AA seq
1135 aa
AA seq
DB search
MESSACQWRRLPGGPSLRPLTAPEYGVPREQQLQALQDLTRAHLQSFDFAVGNGLLRAVQ
AIPPLELAFKNDRLTLAITGAVISPPMVPKGTICKEMKIYPAECRGRRSTYRGKLVADIS
WSVNGISKGVIKQSLGHVPIMVKSQLCNLHGLSPKALIEHHEEEEEMGGYFIINGIEKVI
RMIIMPRRNFPIAMIKPKWKSRGSGYTQYGISMRCVREEHTAINMTLHYLESGTVMVNFI
YQKELFFLPLGFVLKGLVGFSDFQIFQELIKGKEDDTFYKNCVSQILRVLSEEGCMTQKQ
VLIYLGQRFRVKLNLPEWCPSEQVGEFLFEQCICIHLKSKVEKFYLLCLMTRKLFTLAKE
GCMEENPDSLMNQEVLTSGQLYLMFLKEKIEVWLQSIKIALEKKAQKSNLPFNSESMSKI
LGRGTDLTRMLEYLLATGNLRSKSGLGMLQNSGLSIIADKLNFIRYLSHFRCVHRGSAFL
KMRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAPCEIVTHCSYTTSLPSLLCSLGV
TPADGISSQPYSQCYPVVLDGSLVGWIEEDLAPGLVETLRHCKAMQEKKIPVWTEVVLIP
MTGKPSLYPGLFIFTTPSRMMRPVRNLALGKEEWIGTMEQVFMNIAVLENEIELGLTTHQ
ELFPHSMLSVVANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTFPYRSDDKLYRLQTPQS
PLVRPAMYDHYDMDSYPTGTNAIVAVITYSGYDMEDAMILNKSSWERGFGHGSIYKTDRI
DLAEKIKQGEDNLVFGIGPDRAVTLQNLDADGLPPIGTKLQYGDPYYSYLNLNTGESFVT
YHKNMEVCVVDNIKVCSNDIGTGRFKCVCITLRVPRNPTIGDKFASRHGQKGILSRLWPA
EDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEKNSAV
EYFGKMLKAGGYNYYGTERMYSGVSGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARD
KVTNQPLGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVQCGSLLST
LLKPPPVWSTTRIRQHICTLCNRNDTIETVAVPYVFRCFVAELAAINVKVKLDVN
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtcggcgtgccaatggcggcggttgcctggcggcccgagcctgaggcccctg
acggcgccggagtacggcgtcccccgggagcagcagctgcaggccctgcaggacctgacc
cgggcccacctccagtccttcgacttcgccgtcgggaacgggctcctcagggcagtgcag
gccattccacctttggagcttgcttttaagaacgaccggctcactttggccattacagga
gccgtcatcagccctcctatggttcccaaagggactatatgcaaagagatgaaaatttac
ccagccgaatgcaggggacgcagaagcacctatcgtggaaaattagtggctgatatcagc
tggagcgtgaatggcatttctaaaggggttattaaacaatcccttggccatgttccaatc
atggtgaagtcccaactctgcaatctccatggtctttctcctaaagcactcattgaacac
cacgaggaggaagaggaaatgggaggctatttcataattaatggtatagaaaaagtgatc
agaatgatcattatgccaagacgcaactttcctattgcaatgataaagccaaaatggaaa
tctagaggttctggttacacacaatatggcatctcaatgcgttgtgttagagaagaacac
acagcaattaacatgaccctccattaccttgaaagtggcaccgtgatggtgaacttcatc
tatcagaaggagttgttctttcttccattaggatttgtattaaagggattggttggtttc
tcagatttccaaatttttcaggagttgatcaaagggaaagaggatgatacattctacaag
aactgtgtgtctcagatactgagggtgttatcagaagagggctgcatgacacaaaagcag
gtcctgatctacctggggcagcgcttcagagtgaaactgaaccttcctgagtggtgcccc
agtgagcaagttggagagttccttttcgaacaatgtatctgcatacatctgaaatccaaa
gttgagaagttctacttgctttgtctcatgacccggaagctattcactttagccaaagaa
ggttgcatggaagagaatccggacagcttaatgaatcaagaggtgctcacatcaggacaa
ctttacctcatgtttttaaaggaaaaaattgaagtctggctacagtctattaaaatagcc
ttagagaagaaagctcagaagtcaaatttaccttttaattcagaaagcatgtcgaagatt
ctaggcaggggaacagatcttacaaggatgctagaatatctccttgctacagggaacctt
cgctctaaaagcggtctgggcatgctgcagaattctggtctgtccattatcgcagacaag
ctgaacttcattcgctatctctcccacttccgctgtgtgcacagaggttctgctttcctc
aagatgagaaccacaactgtgcgtaaactattgccagagtcctggggttttctttgtcct
gtccacacccctgatggtgagccctgcggtttgatgaatcacatgacagccccgtgtgaa
atagtaacacactgttcatacacaacctccctgccatctttgctttgctctttaggagtc
actccagccgatggtatttccagccagccctactctcagtgttacccagttgttttagat
ggatctctggtaggttggatagaggaagatctggctcctggccttgtggagacactccgg
cactgtaaggcaatgcaggagaagaaaattccagtttggacagaggtggtccttatccca
atgacaggtaaacccagcctgtacccagggctcttcattttcactacccctagtaggatg
atgcgccctgtacgaaacctagccctggggaaagaggaatggattggcacaatggagcag
gttttcatgaacattgctgtattggagaatgaaattgaacttggactgaccactcaccag
gaactctttccccacagcatgttaagtgtggtagcaaatttcattccattctctgatcac
aatcagagtccaagaaatatgtaccagtgtcaaatgggcaagcaaacaatgggttttcct
cttctgacattcccctataggtcagatgataaactctaccggcttcaaacccctcaaagc
ccgttagttcggccagccatgtatgatcattatgacatggactcttacccaactggtaca
aatgcaattgttgctgtgatcacctatagtggctatgacatggaagatgcaatgattctg
aacaagtcttcgtgggaaagagggtttggccatggaagtatctataagactgatcgcatt
gacctagcagaaaaaatcaagcaaggagaagacaatctggtgtttgggattggtcctgac
agagcagtaactttacagaatctcgatgctgatggcctgccccccataggaaccaaactt
caatacggggacccttactatagctatttgaatctcaacacaggggaaagctttgtgaca
tatcacaaaaatatggaagtctgtgttgtggataacattaaagtttgtagtaatgacatt
ggaactggacgattcaagtgtgtgtgcatcactctgcgagtcccccgaaatcctacaata
ggggacaagtttgctagccggcatggacagaagggcatcctgagccggctgtggccagct
gaggacatgccgtttacagaaagtggaatggtgccagacatcctcttcaaccctcatggc
ttcccatcccgaatgaccattggcatgttaattgagagtatggcagggaagtctgcagca
ctgcatggactttgtcatgatgccacccctttcacattttctgaaaagaactctgctgtg
gaatactttggcaagatgttaaaggctgggggctacaattactacgggacagaaagaatg
tacagtggtgtatcaggagtagagcttgaagctgacatttttattggtgttgtctactac
cagcgccttaggcacatggtctctgacaagttccaggtgaggaccacaggagccagagat
aaagtcaccaaccaaccacttggaggaaggaatgttcagggtggcatccgctttggagag
atggaacgggatgctttgttggctcatggaacgtccttcttgctgcatgatcgcctcttc
aactgctccgatcgttcagtggcccatgtttgtgtccagtgtggcagcctgctttctact
ctattaaaacctccgcctgtgtggtccaccacacgtatcaggcaacatatttgtaccctt
tgcaataggaatgacaccattgaaactgttgcagttccttacgtcttccgttgttttgtg
gcagaattggctgccattaatgtcaaagtgaaacttgatgtgaattag
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