Stigmatella aurantiaca: STAUR_4965
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Entry
STAUR_4965 CDS
T01425
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sur
Stigmatella aurantiaca
Pathway
sur03030
DNA replication
sur03410
Base excision repair
sur03420
Nucleotide excision repair
sur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STAUR_4965
03410 Base excision repair
STAUR_4965
03420 Nucleotide excision repair
STAUR_4965
03440 Homologous recombination
STAUR_4965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sur03032
]
STAUR_4965
03400 DNA repair and recombination proteins [BR:
sur03400
]
STAUR_4965
Enzymes [BR:
sur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STAUR_4965
DNA replication proteins [BR:
sur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
STAUR_4965
DNA repair and recombination proteins [BR:
sur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
STAUR_4965
NER (nucleotide excision repair)
GGR (global genome repair) factors
STAUR_4965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ADO72743
UniProt:
E3FFI6
LinkDB
All DBs
Position
complement(6117477..6120176)
Genome browser
AA seq
899 aa
AA seq
DB search
MVSSPLRSAPVLTLIDASSFIFRAYHAVPPLSTSKGVPTNAVLGFTRMVLKSLKDLEPTH
IALAFDKDSRAERQKIDPNYKAHREGPPEDLVPQFALIRKVVEALNLPVLEVPGWEADDV
IGTLAARAKAEGFCVQVVTGDKDFIQIVDEDVRLFDPMKDVHTGPAEVKERLGIEPRQMR
DYLSLIGDAVDNVPKVPGIGDKTAAALLQQFGDVDTMLARLDEVKKPKIREAISSHRESL
LRARQLVTFNTQLDLKVTIPELIRRPIDNARARQLFTELEFFRLVNELPADTSTPKPTEP
AVPAAPVQVITSEEELKVLTEAAREAGSLFLVPAYAGPPFATPLVGLGIALPDGRTAYVP
LRHDVLGSVQVPEARFAHVMGGLLADPAVKKGGHDLKVLSLLLGGMKLTLQGAHDDVELL
SYLLNPSRREHALPDLSRERLGLELPALPATAEGKKGRPLVEHSAEEVAAAYGARADAAR
RLAPRLWEELEAIGLAALARDMELPLLPILARMEQQGVKLDTAVFKTLSTQVDAECETKL
KHIHTLAGQEFNVGSNPQLAQVLYEKLQLPILKKGKTGPSTDQEVLEKLAEQHPLPGAIL
EYRSLSKLKSTYLDTLPGLVAKDGRIHTTYHQAATATGRLSSSDPNLQNIPVRTELGREI
RRAFVAEAGYQLVSADYSQVELRLLAHIAEDPVLLDAFQHDEDIHSRTAAEIFGVTPDKV
DRDQRRVAKTVNFGIAYGLSPHGLSTRLSISVEEARDIIERYFTRYAGIRRYLEDTVERA
RKTGYVETMFGRRRLMADLNSKNRAVAQAAERAAINMPIQGTAADLIKKAMLAVDEALTK
ERLATVMLLQVHDELLFEAPEAEVDRVKALARQCMSSVATLKVPLKVDVGAGKTWADAH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgagccccctgcgctccgcccccgtcctgacgctgatcgacgcctccagcttc
atcttccgcgcctaccacgcggtgccccccctctccacgagcaagggggtgcctaccaac
gccgtgctgggcttcacgcgcatggtgctcaagtccctgaaggacctggagcccacccac
atcgcgcttgccttcgacaaggacagccgcgccgagcgccagaagatcgatcccaactac
aaggcccaccgcgaaggccccccggaggatctggttcctcagttcgcgctcatccgcaag
gtggtggaggcgctcaatcttcccgtcctcgaggttcccgggtgggaagcggacgacgtc
attggcaccctggccgcccgcgccaaggccgaggggttctgcgtccaggtggtgacgggc
gacaaggacttcatccagatcgtcgacgaggacgtgcgcctcttcgatccgatgaaggat
gtgcacaccgggcccgccgaggtgaaggaacggctgggcatcgagccccggcagatgcgc
gactacctgtcgctcatcggcgacgcggtggacaatgtccccaaggtccccggcattggg
gacaagacggcggcggcgctgctccagcagttcggggacgtggacacgatgctcgcccgg
ctggatgaggtgaagaagccgaagatccgcgaggcgatctcttcccaccgcgagagcttg
ctccgcgcccggcagttggtgacgttcaatacccagttggacctgaaggtcaccattccg
gagctgatccgccgtcccatcgataacgcccgtgcgcggcagctcttcacggagctggag
ttcttccggctcgtgaatgagttgcccgcggacacctccacgcccaagcccaccgagcct
gcggtccccgcggcccccgtgcaggtgatcaccagcgaggaggagctgaaggtcctgacg
gaggcggcccgcgaggcgggctctctcttcttggttcccgcctacgccgggcctcccttc
gccacgccgctggtggggttgggaatcgccctgccggatgggcgcaccgcctacgtgccc
ctgcgccatgacgtgctcggctcggtgcaggtgccagaggcacgctttgcccacgtcatg
ggcggtctgctcgcggatcccgccgtgaagaagggggggcatgacctcaaggtgctctcg
ctgttgctcggcggcatgaagctgacgctccagggggcccatgacgatgtggagctgctg
agctacctgctcaacccttcacgccgggagcatgcgcttccggacctgagccgcgagcgg
ttggggctggaattgcccgcgctgcccgccacggcggaggggaagaagggccggcccctg
gtggaacacagcgcggaggaggtggccgccgcctatggggctcgcgcggatgcggcgcgg
cggctggccccccgcctttgggaggaactggaggcgattgggctggcggcgctggcacgt
gacatggaactgccgctgttgcccatcctggcgcggatggagcagcagggggtgaagctg
gacacggccgtgttcaagaccctctccacccaggtggacgccgagtgtgagacgaagctc
aagcacatccacacgctggcggggcaggaattcaacgtgggctccaacccccagctggcg
caggtgctctacgaaaagctccagttgcccatcctcaagaagggcaagacgggcccctcc
acggaccaggaggtgctggagaagctggccgagcagcaccccctgcccggcgccatcctc
gagtaccgctcgctgtccaagctcaagagcacctacctggacacgctgccggggctcgtg
gcgaaggatgggcgcatccacaccacctaccatcaggcggccaccgccaccgggcggctc
tcctcgtcggacccgaaccttcagaacatccccgtgcgcacggagctggggcgggagatc
cggcgcgccttcgtggcggaggcgggctaccagctcgtctccgcggactacagtcaggtc
gagcttcggctgctggcgcacatcgcagaggatccggtcctcctggacgccttccagcat
gacgaggacatccacagccgtacggcggcggagatcttcggcgtgacgccggacaaggtg
gaccgggaccagcgccgggtggccaagacggtcaacttcggcatcgcctacggcctgtca
ccgcacgggctgtccacccggctgagcatctccgtggaggaggcgcgtgacatcatcgag
cgctacttcacccgctacgcgggcatccgccgttacctggaggacaccgtcgagcgggcg
cgaaagacgggctacgtggaaacgatgttcggccgtcggcggctgatggcggatctgaac
tcgaagaaccgcgccgtggcccaggctgccgagcgggccgccatcaacatgcccattcag
ggcaccgcggcggatctcatcaagaaggccatgctggcggtggatgaggcgctcacgaag
gagcggctggccacggtgatgctgctccaagtgcacgacgaactgctcttcgaggcaccc
gaggccgaggtggaccgggtgaaagcgttggcgcgccagtgcatgtcctcggtggccacc
ctcaaggttcccctcaaggtggacgtgggcgcggggaagacctgggcggacgcccactga
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