Serratia ureilytica: J0X03_21705
Help
Entry
J0X03_21705 CDS
T07185
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
suri
Serratia ureilytica
Pathway
suri00330
Arginine and proline metabolism
suri00480
Glutathione metabolism
suri01100
Metabolic pathways
suri01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
J0X03_21705 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
J0X03_21705 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
J0X03_21705 (speF)
Enzymes [BR:
suri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
J0X03_21705 (speF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QSR06987
LinkDB
All DBs
Position
4585706..4587868
Genome browser
AA seq
720 aa
AA seq
DB search
MKKLKIAANTQTLGCFETERDIVDVHHSDFNDVAAIVLSVEDVAQGMVARIEEHGLNIPL
FVAVCCEEELDNAVLPALHGVFELCGKNTQFYGKQLEAAAAKYESELLPPFFNTLTQYVE
MGNATFACPGHQGGEFFRKHPAGRQFFDFYGETLFRSDMCNADVKLGDLLIHEGAPCAAQ
QHAAKVFNADKTYFVLNGTSASNKVATNALLTRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFDERYLRQQIREVAPERANEARPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQSRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGKSGQRL
WQECVRVGIEARKMLLDTCTMIKPFVPDQIDGKPWQAYDTAAMANDLRFFNFVPGEKWHA
FEGYAESQYFVDPCKLLLTTPGIDTANGSYSEFGIPATILANYLRENGIVPEKCDLNSIL
FLLTPAEDIAKMQHLVALIARFEKHIEQNSLLSEVLPAVYKNHQQRYKNYTIRQLCQEMH
DLYVSYDVKELQKEMFRKSYFPRVVMNPQDANTEFVRGNVELVSLAKAEGRIAAEGALPY
PPGVLCVVPGEIWGGAAQRYFLALEEGINLLPGFAPELQGVYIQQDEDGWNRAYGYVMKN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaaaaattgccgccaacacccaaaccctcggctgctttgaaactgaacgc
gacatcgtcgatgtgcatcacagcgatttcaatgacgtcgccgccatcgtgctgtcggta
gaagacgtcgcgcaaggcatggtggcgcgcatcgaagagcacggcctgaacattccgctg
ttcgtcgccgtctgctgcgaagaagagctggataacgccgtattgccggcgctgcacggc
gtgtttgagctgtgcggcaagaatacccagttctacggtaaacagctggaggccgccgcc
gcaaaatatgagagcgagctgctgccgccgttcttcaacacgctgacgcagtacgtggaa
atgggcaacgccactttcgcctgccccggccatcagggcggcgagttcttccgcaaacat
ccggcgggccgccagttcttcgacttctacggcgaaacgcttttccgttcggacatgtgc
aacgccgacgtcaaactgggcgatctgttgatccacgaaggcgcgccttgcgcggcgcag
cagcacgccgccaaggtgttcaacgccgacaagacctacttcgtgctcaacggcacctcg
gcctcgaacaaggtggcgaccaacgctctgctgacgcgcggcgatctggtgctgtttgac
cgcaacaaccataaatccaaccaccacggcgcattgatccaggccggcgccacgccggtt
tatctggaaaccgcgcgcaacccgttcggctttatcggcggcatcgacgcgcactgcttc
gacgagcgctacctgcgccaacagatccgcgaagtggcgccggaacgcgccaacgaagcc
cgcccgttccgcctcgcgatcatccagctcggcacctacgacggcactatctacaacgcc
cgtcaggtggtcgacaagattggccacctgtgcgattacatcctgttcgactccgcctgg
gtgggctatgagcagttcattccgatgatgaaagactgctcgccgctgctgctggagctg
aacgagaacgatcccggcatcatcgtcacccagtcggtgcacaagcagcaggccggcttc
tcgcagacctcgcagatccacaaaaaagacaagcatatcaaggggcagagccgctactgc
aaccacaagcgcttcaacaacgcctttatgctgcacgcctccaccagcccgttctatccg
ctgttcgccgcgctggacgtcaacgccaagatgcacgagggcaagagcggccagcgcctg
tggcaagaatgtgtgcgcgtgggcatcgaagcgcgcaaaatgctgctggatacctgcacg
atgatcaaaccgttcgtgccggatcagatcgacggcaagccgtggcaagcctatgacacc
gcggcgatggccaacgatctgcgcttcttcaacttcgtgcccggcgaaaaatggcacgct
tttgagggctatgccgaatcgcagtacttcgtcgatccgtgcaaactgctgctcaccacg
ccgggcatcgataccgcgaacggcagctacagcgagttcggcatcccggcgaccattctg
gccaactacctgcgcgaaaacggcatcgtgccggaaaaatgcgatctcaactcgatcctg
ttcctgctgacgccggcggaagacatcgccaagatgcaacacctggtggccctgatcgcc
cgcttcgagaagcacatcgagcaaaactccctgctcagcgaggtgctgcctgcggtctat
aaaaaccaccagcagcgctacaaaaactacaccatccgccagctgtgccaggaaatgcac
gacctttacgtcagctacgacgttaaagaactgcaaaaagagatgttccgcaaaagttat
ttcccgcgcgtggtgatgaatccgcaggacgccaataccgagtttgtacgcggcaacgtg
gaattggtctcgctggccaaggccgaggggcgcatcgccgccgaaggcgccctgccttac
ccgcctggcgtgctgtgcgtggttcccggtgaaatttggggcggcgccgcgcagcgttat
ttcctggcattggaagaaggcatcaacttattgccgggattcgcgccggaactgcagggc
gtttatatccaacaggatgaggacggctggaaccgcgcttacggctacgtcatgaaaaat
taa
DBGET
integrated database retrieval system
