Sturnus vulgaris (common starling): 106854196
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Entry
106854196 CDS
T08833
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svg03016
]
106854196 (CDKAL1)
Enzymes [BR:
svg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
106854196 (CDKAL1)
Transfer RNA biogenesis [BR:
svg03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
106854196 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
106854196
NCBI-ProteinID:
XP_014733448
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MPAACESVLEDIEDIVSAEDLKPHERQFVRKNVFPKVRKRNSQKNVQTDDEPPSDSVIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILSHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVELYRFPSLFINQFYPRPGTPAAKMPQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVHTASISRPLAKGEVSGLTEDFRRSAQNGTNWKAQPSAEIPVKTRL
GSWMALQLPWQQGGGGLKILSVSLALLAALVMFYYGGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgagtcagtgctcgaggatattgaagacattgtgtcagcagaagat
ttgaagcctcacgagcggcagtttgtgaggaagaatgtttttcccaaagtgagaaaacgc
aactcccaaaaaaacgttcagacagatgatgagcccccaagtgacagcgttattcctggt
gttcagaaaatctggattcgtacatggggatgttctcacaataattcggatggtgaatac
atggctggacagctggctgcatatggatacaaaattacagacaactctgctgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgctgaggaccatttcagaaactca
atcaagaaagcccaagaagggaagaagaaagttgttctagcaggctgtgtaccacaagcc
caacctcgccaggagtacctgaaaggcttgagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaa
aaggataatggaaaacgtttggggggagcacgattggatttgccaaagattaggaagaat
ccgctgatagaaataatttccatcaatacagggtgtctcaatgcatgtacctactgtaaa
actaagcatgccagaggagatctagcaagttatcctattgaagaactggtggagagagcc
aagcagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccccacgcttctgtggaagctggttgaagttatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggccaagattctcagtcatccaagagtatatgcttttctgcacataccagtc
cagtcagcctctgacagtgtgctcatggacatgaaaagagaatactgtgtggcggacttc
aaacaagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatc
atttgtggttttccaggagagacagatgaagattttcaagaaaccatgaaactcgtagag
ctgtacaggtttccaagcttgtttattaatcaattctacccacgtccaggaaccccagct
gcaaaaatgcctcaagttccagctgcagtgaaaaaacagagaacgaaggatctgtcccag
ctgtttcattcatacaatccatatgatcataaggttggtgagaggcagagagttctggta
acagaagaatcctttgactccaattattacgttgctcacaatcccttctatgagcaggtt
cttgtgccaaaggatcctctgttaatgggtaagatggtagaagtgaatatttatgaagct
gggaaacattttatgaaggggcagccagtatcagatgccagagttcacactgcatccatc
agcagaccgttagcaaaaggagaagtttctggtttaacagaggatttcagacgttcagca
cagaatggcacaaactggaaagcacagccttctgctgagatcccagtgaaaacacggctc
ggctcctggatggctttgcagctcccatggcaacaagggggaggtggactgaagatcctg
tctgtcagcctggctctactggcagctcttgttatgttttactacggaggaatgaaaaca
gaactgtga
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