Sturnus vulgaris (common starling): 106855419
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Entry
106855419 CDS
T08833
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106855419 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
106855419
NCBI-ProteinID:
XP_014735564
LinkDB
All DBs
Position
Unknown
AA seq
2552 aa
AA seq
DB search
MERLLAPGLLVLLLPALTRGLRCSQLAESCLNGGKCETFPNGTEVCQCSGAYVGERCQLP
NPCLSSPCKNAGTCTALVRGSTVDYTCACRLGFTDELCLTPRDNVCLSNPCRNGGTCDLL
TLSEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYICRCTAGFHGANCKQDVN
ECNISPPVCKNGGSCTNEVGTYQCFCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQIGDTT
YDCTCLPGFTGQNCEENINDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFHGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECTEGFTGAHCEVDIDECDPDPCHYGTCKDSIASFTCLCQPGYTGHRC
DININECQSQPCKNGGTCQDRNNAYNCICLKGTTGPNCEINLDDCASNPCDYGKCIDKIN
GYECTCEPGYTGRMCNINIDECASNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNEC
NSNPCIHGKCHDGLNGYKCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGSPCKN
GGECQESEDYKSFSCSCPAGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCACRTGFS
GRNCDTDIDDCKPNPCHNGGSCSDGIGTFFCECLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCVCLPGFTGSYCEH
NINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTSNL
YHCECNSGWTGLYCDVPSVSCEVAAKQRGIDVAHLCRNSGLCVDSGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCKDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCTPAFTG
PECQYPASSPCTSNPCYNGGTCEFFSDASPYYRCNCPANFNGLNCHILDFDFQGGIGQDI
IPPKIEEKCEIAVCAGYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYY
GNEEELKKHYIKRSTEDWSDMPSAVINKVKSSLYSRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPTKSSQLYPMYVVG
AALVLLAFIGLGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEEDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAPTP
PQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASLHN
QTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIR
NRATDLDARMHDGTTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAVNNVE
AAMVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQ
ERMHHDIVRLLDEYNLVRSPTLHNGPLGAPTLSPPLCSPSSYIGNLKPAVQGKKARKPST
KGLSCNGKDAKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTSPF
QQSPSMPLNHLPGMPDAHLSINHLNMAGKQDMAMGNSSRMGFDSVPPRLSHLPVSSPSTG
MSSAPMSFSVGSGAGLNGQCDWLTRLQNGMVQSQYNPLRGNLQPGAHQQPQNLQHGMMTS
LHNGLPTTSLSQMMSYQPMPNTRLASQPHLMQSQQLQQMQQQQQQLQQPNLQPPPPQQQQ
QPQQPAQQPQQPQQHHNPGSNGSGHMGQNFLGTELSQPELQPVSGGAMAVHTILPQDSQM
LPTSLPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSS
SPHSNVSDWSEGISSPPTSMQSQMGHIPEAFK
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctcctggcgcccggcctcctggtgctcctgctgcccgccctgacgcgaggt
ttacggtgctcgcagcttgccgaatcctgcctcaacgggggcaagtgtgaaacttttccc
aacgggacggaggtgtgccagtgtagcggtgcctacgtgggcgagcggtgccagctgccc
aacccctgcctgagctccccctgcaagaacgcgggcacctgcacggcgctggtgcggggc
agcaccgtggattacacctgtgcctgccgcctgggcttcaccgacgagctgtgcctgacg
ccccgtgacaacgtctgcctcagcaacccctgccgcaacggtggcacctgcgacctgctc
accctcagcgagtacaagtgtcgctgcccacccggctggtcaggtaaaacctgccagcag
gccgacccctgtgcctccaacccctgtgccaacgggggccagtgcgtgcccttcgaagcc
cactacatctgccgctgcaccgccggcttccacggcgccaactgcaagcaggacgtcaac
gagtgcaacatctccccacctgtgtgcaagaacgggggcagctgcaccaacgaggtgggc
acctaccagtgcttctgcaagccagcctacactgggcagaactgtgagcacctctacgtg
ccctgcaacccctcgccctgccagaacgggggcacctgccgccagattggggacaccacc
tacgactgcacctgcctgccagggttcacgggtcagaactgtgaggagaacatcaacgac
tgtccaggcaacaactgcaagaatgggggcacctgcgtggacggcgtcaacacctacaac
tgccagtgcccacctgagtggacaggtcagtactgcactgaggacgtggacgagtgccag
ctgatgcccaacgcctgccagaacggtggcacctgccacaacaaccacggtggctacaac
tgtgtctgtgtcaatggctggacgggcgaggactgcagcgagaacatcgatgactgtgcc
atggccgcctgcttccacggggccacctgccacgaccgggtggcctccttctactgcgag
tgcccccacggccgcacaggtttgctgtgtcacctggacgatgcctgcatcagcaacccc
tgcaacgagggctccaactgtgacaccaaccccgtcaatggcaaagccatctgcacgtgt
ccctcggggtacatggggccagcctgcaaccaggacgtggacgagtgctcgctgggtgcc
aacccatgtgagcatgcggggaagtgcatcaacacccaagggtccttccagtgccagtgt
ctgcagggctactcaggccctcgctgcgagattgatgtcaatgagtgcctctccaacccc
tgccagaatgatgccacctgcctggaccagatcggggagttccagtgcatctgcatgccc
gggtacgagggggtttactgcgagatcaacacggacgagtgcgccagcagcccctgcctg
cacaacggcaactgcctggacaagatcaacgagttccactgcgagtgccccactggcttc
aacgggcacctgtgccagtttgacatcgacgaatgtgccagcaccccctgcaagaacggt
gccaagtgcgtggacggccccaacacttacagctgcgagtgcaccgaaggtttcacaggt
gctcactgcgaggtcgacatcgatgagtgtgaccctgacccgtgccactatgggacctgc
aaggacagcattgcctccttcacctgcctctgccagcccggctacacgggccaccgctgt
gacatcaacatcaacgagtgccagagccagccctgcaaaaatgggggaacctgccaggac
aggaacaacgcctacaactgcatctgcctcaaagggaccacgggtcccaactgtgagatc
aacctggatgactgtgccagcaacccctgtgactacggcaagtgcatcgacaagatcaat
ggctacgagtgcacctgcgagccggggtacacagggcgcatgtgcaacatcaacatcgat
gagtgtgccagcaacccctgccacaacgggggcacctgcaaggacggcatcaatggcttc
acctgcctgtgccccgagggcttccacgaccccaaatgcctgtctgaagtgaatgagtgc
aacagcaacccctgcatccatgggaaatgccacgatggattgaatggctacaagtgtgac
tgtgaccctggctggagtgggacaaactgtgacattaacaacaatgagtgtgaatccaat
ccctgcatgaacggtggcacctgcaaggacatgaccagtggctacatctgcacctgcagg
gaggggttcagtggccccaactgccagaccaatatcaacgaatgtgcttccaacccctgc
ctgaaccagggcacgtgcattgatgatgttgctggctacacctgcaactgcctcctgccc
tacacaggagccacctgtgaggatgtgctggccccctgtgctggcagcccctgcaagaac
ggcggcgagtgccaggagtcagaggactacaagagcttctcctgcagttgccccgctggc
tggcaaggtcagacctgtgagattgacatcaatgagtgtgtgaagagcccctgcaggaat
ggggccacgtgccagaacaccaacgggagctaccgctgtgcctgccggaccggcttctcc
ggccgcaactgcgacaccgacatcgacgactgcaagcccaatccatgccacaacggtggc
tcctgctctgatggcattggcacgttcttctgtgagtgcctggctggtttccgtgggccc
aagtgcgaggaggacatcaatgagtgcgccagcaacccctgcaagaacggggccaactgc
accgactgtgtcaacagctacacctgcacctgcccctctggcttcagtggcatccactgc
gagaacaacacccctgactgcacagagagctcctgcttcaatggtgggacgtgcgtggat
ggcatcaacaccttcacctgtgtgtgcctgcccggcttcacgggcagctactgtgagcac
aacatcaatgagtgtgactccaagccatgcctgaacgggggcacgtgtcaggacagctac
gggacgtacaagtgcacctgtccccaggggtacaccgggctcaactgccagaacctggtg
cgttggtgtgactcctcgccctgcaaaaacggaggcaagtgctggcagaccagcaacctg
taccactgcgagtgcaacagtggctggacagggctctactgcgatgtccccagtgtgtcc
tgcgaggtggctgctaagcagagaggtatcgacgtagcacatctctgcaggaactcgggg
ctctgtgttgacagtggcaatactcatttctgccgctgccaagccggctacaccggcagc
tactgcgaggagcaggtggatgaatgctcccccaacccctgccagaatggagccacctgc
acagactacctgggaggatattcctgcgagtgtgtggctggttatcatggagttaactgc
tcagaggagatcaatgagtgcttgtcccacccatgccagaatggaggaacctgcatcgat
ctcatcaatacctacaaatgctcctgccccagaggaactcaaggggtgcactgtgagatc
aatgtggatgactgcagccctttctttgatcctgtcaccctggggcccaagtgctttaac
aatggcaagtgcaaggatcgggtaggtggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagatgtcaacgagtgcctgtccaacccctgcgacgcccgcggc
acccagaactgcgtgcagcgggtcaacgactacaaatgcgagtgcagacctggctatgca
ggccgtcgctgtgacaccgtggtggatggctgcaaaggcaaaccctgcaggaatggggga
acctgtgctgtcgccagcaacaccggccgtggtttcatctgcaagtgccccccgggattc
gtgggtgccacctgcgagaacgactcccgcacctgtgggaacctgcactgcctgaacggt
ggcacctgcatctccatccacaagagctccaagtgcatgtgcacaccagccttcacgggc
cctgagtgccagtacccggccagcagcccctgcacctccaacccctgctacaacgggggc
acctgcgagttcttcagcgacgcctccccctactaccgctgcaactgccccgccaacttc
aacggcctcaactgccacatcctggactttgacttccagggtggcatcgggcaggacatc
atcccccccaaaatcgaggagaagtgcgagatcgccgtgtgcgcgggctacgccggcaac
aagatctgcgacgggaaatgcaacaaccacgcctgcggctgggacgggggcgactgctcc
ctcaacttcaacgacccctggaagaactgctcccagtctctgcagtgctggaagtatttc
aacgatggcaagtgtgactctcagtgcaacaacgctggctgcctctacgatgggtttgac
tgccagaagtacgaggggcagtgcaaccctctgtatgaccagtactgcaaagatcacttc
tcggatggtcactgcgaccagggctgcaacaattttgagtgtgagtgggatggtctggac
tgtgcaaacaacatgccagagaagctggcagatggcacactggtggtggtggtgctcatc
acccccgagaacctgaagaacaattccttcaacttcctgcgggagctgagccgtgtgctg
cacaccaacgtggtcttcaagaagaaccccaagggggaatatatgatcttcccatactat
ggcaatgaggaggagctgaaaaaacattacatcaagaggtccacagaggactggtctgat
atgcccagtgctgtcatcaacaaagtgaagagcagcctctactccagggctggcaggagg
cagaagagggagctcgaccagatggacatcagaggatccatcgtctacttggaaattgat
aatcgccagtgcatccagtcatcgtcccagtgcttccagagtgccactgatgtggcagca
ttcctgggagccttggcctcccttggcaacctgaacataccctacaaaatagaagctgtc
aaaagtgaaacggccgagcccacgaagagctcccagctgtatcctatgtacgtggtgggg
gctgcgctggtcttgctcgccttcatcgggctgggggtgctggtgtctcgcaagcgccgc
agggagcatgggcagctttggttccccgaaggcttcaaagtgacagagtcgagcaagaag
aagcgacgggagcccctcggggaggattctgttggactgaaacccctcaaaaatgcttcg
gacggcacgctgatggatgacaaccagaatgagtggggtgatgaggaggacaccaagaag
ttcaggtttgaggagcaggcaatgctgccagacacagatgaccagacagatcacaggcag
tggacacagcagcacctggacgccgctgacctgcgcatttcctccatggccccgacgcct
ccacagggggaaatcgatgctgactgcatggatgtcaatgtcagagggccggatggcttc
acccccctcatgatcgcttcatgcagcggaggagggctggagaccggcaacagcgaggag
gaggacgatgctcctgctgtcatctcggatttcatctaccagggagccagcctgcacaac
cagaccgaccgcacgggcgagaccgcgctgcacctggccgccaggtactcccgctcagat
gctgccaagcgcctgctggaggccagtgctgatgccaacatccaggacaacatgggcagg
acacccctccacgccgccgtgtctgcagatgcacaaggagtcttccagatcctgatcaga
aacagggcaacagacctggatgcccgaatgcatgacgggaccactcccctgatcctggct
gctcgtttggctgtggaggggatgctggatgacctcatcaactgccacgctgatgtcaac
gccgtggatgatttaggcaagtcagccctgcactgggcagctgctgtgaataacgtggaa
gctgcaatggtcctcctgaagaatggtgccaataaggatatgcagaataataaggaggag
accccactgttcctggcagccagggaagggagctacgaaactgccaaggtcctgctggac
cattttgccaaccgggacatcacggaccacatggaccggctgcctcgggacatcgcccag
gagcgcatgcaccacgacatcgtgaggctgctggatgagtacaacctggtgcgcagcccc
acgctgcacaacgggcccctgggggcccccaccctgtcccccccgctctgctcccccagc
agctacatcggcaacctcaaacccgccgtgcagggcaagaaagccaggaagccgagcacc
aaggggctgagctgcaatggcaaggatgccaaagacctcaaagcccgcaggaaaaagtcc
caggatggaaaagggtgtctgcttgacaactccagcgtgctgtctccggtggactccctg
gagtcgccgcacgggtacctctcggacgtggcctctccccctctgatgacatctccgttc
cagcagtccccttccatgcctctgaaccacctgccgggcatgcccgacgcccacctgagc
atcaaccacctcaacatggcgggcaagcaggatatggccatgggcaactccagcaggatg
ggcttcgactcggtgccaccgcgcctgtcccacctgccggtgtccagccccagcacgggg
atgagcagtgcccccatgagcttctcggtgggcagtggggctgggctgaatgggcagtgt
gactggctcacccggctgcagaacggcatggtgcagagccagtacaaccccctgagaggc
aacctgcagcccggggctcaccagcagccccaaaacctgcagcacggcatgatgacctcg
ctgcacaacgggctccccaccaccagcttgtcacagatgatgagctaccagcccatgccc
aacacccggctggcgtcacagccccacctgatgcagagccagcagctccagcagatgcag
cagcagcagcagcagctccagcagcccaacctgcagccaccaccaccgcagcagcagcag
cagccgcagcagccagcgcagcagccacagcagccgcagcagcaccacaaccccggctcc
aacgggagcggccacatgggccagaatttcctcggtacggagctgagccagcccgagctg
cagccggtgagcggcggcgccatggccgtgcacaccatcctgccgcaggattcccagatg
ctgcccacatccctgccctcctccctcgcccagcccatgaccaccacgcagttcctgacc
ccaccttcccagcacagttattcctcccccttggacaacacccccagccaccagctccag
gtgcccgaccaccctttcctcacgccctcgcccgagtcgccggaccagtggtccagctcc
tctcctcactccaacgtgtccgactggtccgagggcatctccagccctcccacgagtatg
cagtcacagatgggacacatccccgaggccttcaagtaa
DBGET
integrated database retrieval system
