Sturnus vulgaris (common starling): 106856076
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Entry
106856076 CDS
T08833
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03440
Homologous recombination
svg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106856076 (BRIP1)
03460 Fanconi anemia pathway
106856076 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svg03400
]
106856076 (BRIP1)
Enzymes [BR:
svg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106856076 (BRIP1)
DNA repair and recombination proteins [BR:
svg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
106856076 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
106856076 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
106856076
NCBI-ProteinID:
XP_014736671
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MSSDGAEYTIGGVKILFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQALYEKSVPSSSCVKEDRKAEPSPRCHCKCHSQPQSYEAAASGSHSAPCSANYPDT
GTSRRPGSPLTSTECKENETLASKLSAKKKLSLRDSENDDFQVDRKRIRPLETEQQVRKR
HCFAKGVQLVDALEVYHQRKNGELTVHSEKSMRTATFSPQTPPGPCTECSCSSGKEPDKD
PSHTKKKENDQLCVPKIFFGTRTHKQITQISRELKRTAYSCVPMTILSSRDYTCIHPVVS
NSSNRNEMCVELLEGKHGRSCSYYHGVHKLSEHHALQPAPRAWDIEDLVSLGRKLRACPY
FAARELMMGADIVFCPYNYLLDPQIRDSMDINLKDQVVILDEAHNIEDCARESVSYGVTE
SQLRAAREELDLMVNNSIRQKHHEPLRAVCCSLINWLQESSGQLVERAYETACKVWSGKE
MLSFLHKMGITGITFPILQKHLAAVLEKEEKVSTHGREELIEVPVVSPATQIVLKGLFMV
LSCLFKENCRFADDYRVALQQTYTWMTENQRDDADASPFFTRPKHKKSSRQKTLVHMLNF
WCLNPAVAFSDLNEVRTIVLTSGTLSPMDSFSSELGVKFAIQLEANHVIRNSQVWVGTVG
AGPSGRKLCATFQHSETFEFQDEVGALLLSVCHTVGQGILCFLPSYKMLEKLKDRWIHTG
LWRNLEDVKTVIAEPQGGAKSDFDELLKIYYDAIKCKGEKDGALLIAVCRGKVSEGLDFC
DENARAVVTIGIPFPNVKDLQVELKRKYNDQHKSTRGLLSGSQWYEIQAYRALNQALGRC
IRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQQIQHHGSFSSALRSLHAFALRNQGAA
DPAHATDLSQGSQQEATIPLSPHVSVKSQEQNLGSEVDVTATISSVHPTAWDQPSDGMAA
VTRSDQQVDAEGHSHHVKQRRKHKGCIPKMPEMKTETEKMNGWTNADIVEENCCSEPLTS
TPVAKNCRATSSSQEQGNGPGDLIDHLNQCQSSLIAEQKPSGPESCLETTHSSVKNAEAA
IAEGHPGKETPAAGRAEPSPLHEDEDESIYFTPELYDDEEPEEQRTEPPLPACCSTGNWV
ECGNCTVPADLFGTNTSETQRVAEKAGAGRNPPGILENARSRDSAGGAVEVAAAAGAEQG
ESQEMETPKRKVSLSRPRNKGVSSFLLGSSGTW
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatggggcagaatatacaatagggggggtgaagatcctcttcccctgcaag
gcttacccctcccagctcgccatgatgaacgctattgttaaaggcttgaataacaggcag
cactgtttgctggagagccccacaggaagtggcaaaagcttggcattactttgttctgca
ttatcatggcagcaggctttgtatgagaaatcagtgccatcctcatcgtgtgtcaaggag
gacaggaaggcagagccatccccacggtgtcactgcaagtgtcactcccagcctcagagc
tacgaggctgcagccagtggttctcacagtgctccttgttctgccaattatcctgacaca
ggaacttccagaagacctgggagcccactgacaagcacagaatgtaaggaaaatgaaaca
ctagcttcaaaactgtctgccaaaaaaaagttatctcttcgtgacagtgagaacgatgat
tttcaagtagacaggaaaaggattcgccctttagaaacagagcagcaggtcagaaaacgt
cactgctttgcaaaaggagtgcagttggttgatgctttagaagtttatcatcagagaaaa
aatggagagctgactgttcactctgaaaaaagcatgagaactgctactttttctccccaa
acacctcctggcccttgcactgagtgttcctgttcttctgggaaagaacctgataaagat
cccagtcacacgaagaagaaagaaaacgatcagttgtgtgttcccaaaatcttttttggg
acacgaacacacaagcaaataacccagatcagcagggagctgaagaggacagcatattcc
tgtgtccccatgacaatcctttccagcagggattatacctgtattcatccagtggtgtcc
aacagtagtaacaggaatgaaatgtgtgtagagctgttggaaggaaaacatggcaggtcc
tgctcttattaccacggtgttcacaagctcagtgagcaccatgccctgcagcctgcaccc
agggcttgggacatcgaggacctggtgagcctgggcaggaagctccgtgcctgtccctat
tttgcagccagagagctcatgatgggggcagacatcgtgttctgtccttacaattatctc
ctggacccacagatccgagacagtatggacattaatctaaaagaccaagtagtcattttg
gatgaagcccacaacattgaggactgtgctcgggagtccgtgagctacggggttacagag
agccagctccgagctgcccgagaggagctggatctcatggtcaacaacagcatcaggcag
aaacaccacgagcccctccgagctgtgtgctgctccctcataaactggttgcaggagagc
tctgggcagctggtggagagagcctatgaaactgcctgtaaggtgtggagtggcaaagaa
atgctcagctttttgcacaaaatgggaataactggcattacttttcccattttacagaaa
catcttgctgctgtcctggaaaaagaagaaaaagtatctacgcatgggagagaggaactt
attgaggtgccagttgtgagccctgcaacacagattgtgctcaaaggcctgttcatggtc
ctgtcctgtctcttcaaagagaactgcaggtttgcagatgattacagggttgctctacaa
caaacttacacctggatgactgagaaccaacgtgatgatgcagatgcaagtcccttcttc
acgaggcccaagcacaaaaagagttcaaggcagaaaacccttgtccacatgctgaatttt
tggtgtttgaaccctgctgtggctttttctgacttaaatgaagttagaacaattgttctg
acatcaggcacactctctcccatggattccttttcctcagagcttggtgtgaagtttgcc
attcagctggaggccaatcacgttatcaggaattcccaggtctgggtcggcacggtggga
gcggggcccagcgggcggaagttgtgcgcgaccttccagcacagcgagaccttcgagttc
caggacgaggtgggagccctgctgctctcagtctgccacacggttggccaaggaattctg
tgctttctgccatcctacaagatgctggagaagttaaaggatcgttggattcacactggc
ttgtggaggaacctggaggatgtgaaaactgtcattgcagagccccagggaggggccaag
agtgactttgatgagctgctgaaaatctactatgatgcaatcaaatgtaaaggagaaaaa
gatggagctctgctcatagctgtgtgcagagggaaggtcagtgaggggctggatttctgt
gatgagaatgccagggcagttgtgaccattggaatccccttcccaaacgtgaaggacctt
caggttgaattaaagaggaagtacaatgaccagcacaaaagtacaagaggccttttatca
gggagtcagtggtatgaaattcaagcttacagagctctcaaccaagccctgggaaggtgt
ataaggcacaggaatgactggggagctcttattttagttgacgaccgcttcaggaataac
ccaaataaatacataacaggattgtccaagtggatccggcagcagatccagcaccacggc
agcttcagcagcgccctgcgatccctgcacgccttcgccctcaggaaccagggggctgcg
gatcctgctcatgccacggacctctcacagggctctcaacaggaggccaccattcctctg
tccccacacgtgtctgttaaaagccaggagcagaatttgggctcagaagttgatgtgact
gcaaccatcagctccgttcatcccacagcgtgggatcagccaagtgacggcatggcagca
gtgacacgaagtgaccagcaagttgatgcagagggtcattctcaccatgtaaaacagaga
aggaaacataaaggctgcatccccaaaatgccagaaatgaaaacagagacagaaaaaatg
aatggttggaccaatgctgatattgtggaagagaattgctgctctgaaccactgacttca
acccctgtagccaagaactgcagggccacaagcagcagccaggagcaagggaatgggcct
ggtgacctcattgatcatttaaatcaatgccaatcatcattaattgcagaacagaaacca
agtggaccagaatcatgtttggaaacaactcattcttcagttaaaaatgctgaggctgca
attgctgaaggacatcctggtaaggaaactccagcagcagggagagctgagccctcacct
ttacatgaggatgaggatgaaagcatttacttcacccctgaactctatgatgatgaagag
ccagaggagcagagaactgaacccccacttccagcctgttgtagcactgggaattgggtg
gaatgtgggaactgcacagtccctgctgatctttttggcaccaacacctcagaaacacag
agagtggctgaaaaagctggggctggcagaaatccccctggaattctggaaaatgcaagg
agcagggacagtgcaggtggtgctgtggaggtggcagctgcagcaggagcagagcaggga
gaatctcaggagatggagaccccaaaaaggaaagtcagcctttccagaccccgaaataaa
ggtgtgtcatccttcctgctgggcagcagtggcacctggtga
DBGET
integrated database retrieval system
