Streptomyces violascens: HWN34_06235
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Entry
HWN34_06235 CDS
T08842
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
svio
Streptomyces violascens
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svio03009
]
HWN34_06235 (rimO)
Enzymes [BR:
svio01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HWN34_06235 (rimO)
Ribosome biogenesis [BR:
svio03009
]
Prokaryotic type
ribosomal protein modification factors
HWN34_06235 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QLA56196
LinkDB
All DBs
Position
complement(1476126..1477598)
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AA seq
490 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWQLVEDAEAADVAVVNTCGFVEAAKKDS
VDALLEANDLKAQGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
GGGIHASHTPRDRRKLLPISPAERQDSAVALPGHAQEPAAAPADLPDGLAPASGPRAPLR
RRLGTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLQETRWLAGQGVKEIMLVS
ENNTSYGKDLGDIRLLETLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVAPYF
DLSFQHSAPGVLRAMRRFGDTDRFLGLLEQIRAKAPEAGVRSNFIVGFPGESEADVAELE
RFLTGARLDAIGVFGYSDEDGTEAAGYEGKLPEEEVAERLARVSRLAEELVSQRADERVG
ETVEVLVESVDEEEGAVGRAAHQAPETDGQILFTSGADLTPGRMVVAKVVGTEGVDLVAE
PLHLIEEAGR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgctctcgtcactctcggatgcgcccgtaacgaggtggat
tcggaggagctcgcaggccgcctggaggcggacggctggcagctcgtcgaggacgccgaa
gccgccgatgtcgccgtcgtcaacacctgcggcttcgtcgaagccgccaagaaggactcc
gtcgacgccctcctggaggccaacgacctcaaggcccagggcagaacccaggccgtggtc
gcggtcggctgcatggccgagcggtacggcaaggagctggccgaggccctccccgaggcc
gacggggtgctcggcttcgacgactacgccgacatctccgaccggctgcagaccatcctg
ggcggcggcatccacgcctcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
cccgccgagcgccaggacagcgccgtcgccctccccggccacgcccaggagcccgcggcc
gcccccgccgacctgcccgacggcctggcacccgcctccgggccgcgcgccccgctccgc
cgccggctgggcaccagccccgtcgcctcggtcaagctggcctccggctgcgaccgacgc
tgctccttctgcgccatcccctccttccgcggctccttcatctcccggcgcccctccgac
gtgctccaggagacgcgctggctggccgggcagggcgtgaaggagatcatgctggtctcc
gagaacaacacctcgtacggcaaggacctcggcgacatccggctgctggagacgctgctg
ccggagctggcggaggtggacggcatcgagcgggtgcgcgtcagctacctccagcccgcc
gagatgcggcccggcctgatcgacgtcctcacctcgacgccgaaggtcgccccctacttc
gacctctccttccagcactccgcgcccggcgtgctgcgcgccatgcgccgcttcggcgac
accgaccgcttcctcggcctgctggagcagatccgcgccaaggcccccgaggccggcgtc
cgctccaacttcatcgtcggcttccccggcgagagcgaggcggacgtggccgagctggag
cgcttcctgaccggcgcccgcctcgacgccatcggcgtcttcggctactccgacgaggac
ggcaccgaggccgccgggtacgagggcaagctccccgaggaggaggtcgccgagcgtctg
gcccgggtctcccgactcgccgaggaactcgtctcgcagcgcgcggacgagcgggtcggt
gagaccgtggaggtactcgtcgaatccgtcgacgaggaagagggcgccgtcggccgggcc
gcccaccaggcccccgagaccgacggacagatcctcttcacgagcggcgcggacctcacc
ccgggccgtatggtcgtggccaaggtggtcggcaccgagggagtggacctcgtcgccgaa
cccctgcacctgatcgaggaggcgggcagatga
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