Shewanella vesiculosa: KDH10_001976
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Entry
KDH10_001976 CDS
T08322
Name
(GenBank) EAL domain-containing protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
svm
Shewanella vesiculosa
Brite
Enzymes [BR:
svm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
KDH10_001976
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GFIT
Motif
Pfam:
EAL
GGDEF
HAMP
CHASE5
CHASE8
Motif
Other DBs
NCBI-ProteinID:
UJL44460
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Position
2311915..2313951
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AA seq
678 aa
AA seq
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MTARFKSLTWKQTNLVVFTALFFAVAIFIIEIALVVVTAKQQLTAAQQELLNSVEQTTTN
AVWSLDDKLASQTLEGIIKVDNVGSAVIELDDGSLFVSEVNETGESSKAYVSLSNRLFGD
LKEIARPLYRPFYFEGNKQQQLIGTLTIFYDTQKLTTKLFNQLQLGLIATLARALLLTLV
LTVVFHRFLTQPIARISEAIDKIDPDYPDENLLPMSKAHKDDELGLVTSKFNQILLQFSQ
TQNKLRKMATRDPLTGLPNRTLLLETLNVTIQRSRVHKRNFALLFIDLDRFKNINDSLGH
AIGDQFLARIARILERVVGDRGSVARLGGDEFVILADEIQTPSQAADFVDKLLAQLNTPI
QLNEHAIHPAASIGISIYPEDGITAEDLIRHADIAMYSAKAAGSNQWSFFKQQMTERAAI
RLRTEASLHDALKNNEFLLYFQPKFDLKTNKVVGCEALIRWQKDGQLISPMSFIPVAEET
GIIIPIGRWVIEQSCKVIREWQRKYNYEIPIAVNVASQQFADASLVPDIKQLAIRYQIRP
ELLEIEITETSLMNDVEQAVTKLEQLKSAGFGIAVDDFGTGYSSLSYLRHLPITTMKIDR
AFVSDLPEDSAIASTILMLGRQLDLTIVAEGIENIQQLEWLKENQCEIGQGFYFSQPLPL
AEFEEKYIISNTAKVIHA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgacggctcgttttaagtctctcacatggaaacaaactaacttagtagtttttactgct
ttgttttttgctgttgctatttttatcatcgaaatagcactcgtcgttgttaccgctaaa
caacagcttaccgcggcacaacaagagctgctcaattccgtcgaacaaaccactaccaac
gcggtatggtcgttagatgataaacttgccagtcaaaccctagaaggcattataaaagtc
gataatgttggctctgcagtcatcgagctcgatgatggttcattgtttgtgtctgaggta
aatgaaaccggagagtcctcaaaagcttatgtttccttaagtaatcgtctgtttggggat
ctaaaagaaatcgcccgtccactgtatcgccctttctattttgaaggaaacaaacaacaa
cagcttattggcaccctgacgattttttacgatacccaaaagctgaccacgaaactgttt
aatcaattacaactcggacttatcgcaacattagctcgagcattattactcacattagta
ttaaccgtagtatttcatcgttttctcactcaaccgatagctcggattagcgaagcaatt
gacaaaattgatcctgattatcctgacgaaaacctgttacctatgtcaaaagctcataaa
gatgatgagttaggactggtgaccagtaagtttaatcaaatattattgcagttcagtcaa
actcaaaataagctgcgcaaaatggcaacccgagatccattaacgggcttaccaaacagg
accttattattagagacattgaatgtcaccattcaacgctctcgagtccacaaacgaaat
tttgctctactcttcattgacttggatcgctttaaaaatattaatgactccttaggccat
gccataggtgatcagttcctagctcgtattgcgcgtatattagaacgagtggtgggtgac
agaggcagcgtggctcgtcttggcggtgatgaatttgttatcttagccgatgagatccaa
acaccttcacaagcggcagactttgttgataaattactcgctcaattaaataccccaatc
cagcttaatgagcacgcaattcatcccgcggcatcgataggcatttctatatatcccgaa
gacggtatcactgcggaagacctaattcgtcatgccgatatcgccatgtacagcgctaaa
gcggctggctctaatcagtggtcatttttcaagcaacaaatgactgaacgtgcggcaata
agacttcgcacagaagcctcattacacgacgcattgaaaaacaacgaattcttattatat
tttcaacctaaatttgatttaaaaaccaacaaagtcgtcggatgcgaagcccttatccgt
tggcaaaaagacggtcaattgataagcccgatgtcatttatccctgtggccgaagaaacc
ggaattattatcccaattggccgttgggttatcgagcaaagctgcaaagtgatccgagaa
tggcaacgtaaatacaattatgagatccctattgcggtgaacgtggcatcgcagcaattc
gctgatgccagtttagtacccgacatcaagcaactggcaattcgataccagatacgtcct
gaattactggaaattgaaattaccgaaacatcgctgatgaatgatgttgaacaagcagtg
actaaattagaacagcttaaatctgccggttttggtattgcggtcgatgactttggcaca
ggatactcgtcattatcctatctacgtcacttgccaataacaacaatgaagattgatcgt
gcctttgtaagtgatcttcctgaagatagtgcaatcgcatcgactattttaatgttgggt
cgtcaacttgatttgaccattgttgctgaaggtattgaaaatattcaacaacttgaatgg
ctcaaagaaaatcaatgtgagattggtcaaggcttttactttagccaaccactgccgtta
gccgagtttgaagagaaatatattatcagtaatacagctaaagtcattcatgcttaa
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