Shewanella vesiculosa: KDH10_003187
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Entry
KDH10_003187 CDS
T08322
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00540
Lipopolysaccharide biosynthesis
svm01100
Metabolic pathways
svm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KDH10_003187 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
svm01005
]
KDH10_003187 (rfaD)
Enzymes [BR:
svm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KDH10_003187 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
svm01005
]
Core region
KDH10_003187 (rfaD)
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
UJL42083
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All DBs
Position
complement(3688005..3688958)
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AA seq
317 aa
AA seq
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MIVVTGAAGFIGSNLVKQLNAMGRNDIIAVDDLTDGTQMFNLADCEIADYLDKDDFIKQI
QAGDFDNALEVIFHQGACSSTTEWDGKFMMTNNYEYSKTLLHYSQANNCQFIYASSASVY
GGSEKFIEQRELEKPLNVYAYSKFLFDQYVRQQKLTSQVAGLRYFNVYGPREQHKGGMAS
VAFHFNNQINHNGVCRLFEGVDGYDNGQQLRDFVFVEDVVKVNLWLWQNPSVSGIYNCGT
GQAQSFNDVANAVIAYHGKGHIEYIPFPDKLKGAYQSYTQADLTQLRAAGYHAEFKTVEQ
AVPEYLNWLKSQHFIGQ
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatagtggttacaggcgcagcagggtttattggtagtaatttagttaaacaacttaat
gccatgggacgaaatgacattattgccgttgacgatttaaccgacggtacccaaatgttt
aatttagccgattgtgaaatcgccgactatcttgataaagatgatttcatcaagcaaatt
caagccggtgattttgataacgcactcgaagtaatcttccatcaaggtgcttgctcatcg
accacagagtgggatggcaagtttatgatgactaacaactacgagtattcaaaaacttta
ttacattatagccaagccaataactgtcaatttatctatgcttcttcggcctcggtatat
ggcggcagcgaaaagtttattgagcaacgtgaactcgagaagccgctgaatgtctacgct
tactccaagtttttattcgaccagtatgtaagacaacaaaaacttaccagccaggtagct
ggtttacgttatttcaatgtctatggtccgcgtgagcaacataaaggcggtatggccagt
gtggctttccactttaataaccaaattaatcataatggtgtatgtcgtttatttgaaggt
gtggatggttatgacaatggccagcaacttcgtgactttgtgtttgtcgaggatgtcgtt
aaggttaatttatggctctggcagaatccatcagtatcgggcatttataactgtggtact
ggccaagcacaaagcttcaatgatgttgctaatgctgtgattgcgtatcatggtaaagga
cacattgagtacattcctttcccagataagcttaaaggtgcctatcagagttacactcag
gctgatttaacccaactaagagccgccggttatcacgccgagtttaaaacggtcgaacaa
gcggtaccagagtatttaaattggcttaagagccagcactttattggtcaataa
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