KEGG   Shewanella violacea: SVI_0529
Entry
SVI_0529          CDS       T01206                                 
Name
(GenBank) proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase, putative
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
svo  Shewanella violacea
Pathway
svo00250  Alanine, aspartate and glutamate metabolism
svo00330  Arginine and proline metabolism
svo01100  Metabolic pathways
svo01110  Biosynthesis of secondary metabolites
Module
svo_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:svo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    SVI_0529
   00330 Arginine and proline metabolism
    SVI_0529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:svo03000]
    SVI_0529
Enzymes [BR:svo01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     SVI_0529
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     SVI_0529
Transcription factors [BR:svo03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    SVI_0529
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH H-kinase_dim
Other DBs
NCBI-ProteinID: BAJ00500
UniProt: D4ZFQ1
LinkDB
Position
complement(623608..626802)
AA seq 1064 aa
MEVITMFKASEVLTGHYDSANLDELFKAITNNYIVDEEQYLSELIKLVPSSDEEINRVTK
RAHEMVNNVRQYDKKGLMVGIDAFLQQYSLETQEGIILMCLAEALLRIPDAATADALIED
KLSGAKWDIHLSKSDSILVNASTWGLMLTGKIVKLDRNIDGKPSSLLNRLVNRMGEPVIR
QAMLAAMKIMGKQFVLGRTVKEALKNSLDKRKLGYTHSYDMLGEAALTKTDAQKYFEDYS
SAIASLGEQSYDESQAPRPTISIKLSALHPRYEVANEDRTLTELYDTLIKLIQQARGVNI
GISIDAEEMDRLELSLKLFQKLFNSDAAKGWGVLGIVVQAYSKRALPVLCWLTRLSKDQG
DEIPVRLVKGAYWDSELKWGQEKGEAGYPLFTRKAGTDVSYLACARYLLSDATRGAIYPQ
FASHNAQTVASITDMAGDRNYEFQRLHGMGEELYDTLLAESGVKTVRIYAPVGAHKDLLP
YLVRRLLENGANTSFVHKLIDPKTPIESLVVHPLVTLQKYKSFANSKIVLPSDIFGEERK
NSKGLNMNIISESEPFFAALDKFKDTTWNAGPLVNGELLSGETNEVVSPYDTTQVVGKLA
FANNQAIEQALTGADAAFSGWCNTPVEVRANALQKLADLLEENREELIALCTREAGKSIQ
DGIDEVREAVDFCRYYAVQAKKMMAQPELLPGPTGELNELFLQGRGIFVCISPWNFPLAI
FLGQVAAALAAGNTVVAKPAEQTSIVGFRAVQLAHQAGIPKDVLQFLPGTGATVGAAITS
DERIAGVCFTGSTGTAKLINRTLANREGAIIPLIAETGGQNAMVVDSTSQPEQVVNDVVA
SSFTSAGQRCSALRVLFLQEDIADRVLEVLKGAMDELSIGNPSSIKTDVGPVIDAMAKAN
LNAHIDHIKQVGTLLKQLELPAGTDKGHFVAPTAVEIDSIKVLEKEHFGPILHVIRYKAS
ELAKVIDEINSTGFGLTLGIHSRNEGHALKIASKVNVGNVYINRNQIGAVVGVQPFGGQG
LSGTGPKAGGPHYLTRFITEKTRTNNITAIGGNATLLSLGDSDE
NT seq 3195 nt   +upstreamnt  +downstreamnt
atggaagtgataactatgttcaaagcgagtgaagttctaactggtcactatgactcagcc
aatctcgatgagctatttaaagccatcaccaataactatattgtcgatgaggagcaatac
ctctctgaactcatcaagcttgtgccttcaagtgatgaggaaattaaccgagtcactaaa
cgtgcacacgagatggttaataacgttcgccaatatgataagaaaggcctaatggtcggt
attgacgccttcttgcaacaatatagcttagagactcaagaaggaatcatccttatgtgt
cttgctgaagccttgttacgtattcctgatgcagccacagctgatgccctgattgaagat
aaattatcaggcgctaaatgggacatccatctaagtaagagtgactcaatactggttaat
gcatcgacctggggcctaatgctcacaggtaagatagtcaaactagatcgaaatattgat
ggtaagccaagcagtctactcaatagactagtaaaccgcatgggtgagccagttattcgc
caagccatgcttgccgccatgaagatcatgggcaagcagttcgtactaggccgcacggtt
aaagaggcgcttaaaaatagcctagacaagcgcaagctcggctatacccatagctatgac
atgctgggtgaagcggcactgactaaaacagatgcccaaaaatacttcgaagactactct
agtgccatcgcatcccttggtgagcagagctacgatgaatctcaggcaccacgcccaacc
atctcaattaagctgtcagcccttcaccctagatatgaagttgccaatgaagacagaacc
ctgaccgagctgtacgacacactcatcaagcttattcaacaggcgcgcggcgtcaatatc
ggtatctccatcgatgccgaagagatggatagactcgagctatcactcaaactgtttcag
aaactgtttaattccgatgcggccaagggctggggggtgttaggtatagtggttcaggct
tactctaagcgtgcgctacctgtgctttgctggttgacccgtctatctaaagatcagggc
gatgaaatacctgtacgcctcgtgaaaggcgcttattgggacagtgagctaaaatggggt
caggaaaaaggtgaagccggttacccgctattcacacgcaaggccggtaccgatgtctct
tacctggcttgtgctcgttacttgttatccgatgccactcgcggtgccatctaccctcag
tttgccagccacaacgcacaaaccgtcgcatcgatcaccgatatggcaggtgatagaaac
tatgagtttcagcgtttacacggtatgggtgaagagctttacgatacccttctcgccgag
agtggtgtgaagacggtacgtatctacgcgccagttggcgctcacaaagacttgctgccc
tatttagtacgtagattactcgagaatggtgccaacacttccttcgtacataagctaata
gaccctaagacgcccatcgaatcactcgtggtgcatccgctagtcacgctgcaaaaatac
aaaagcttcgctaacagcaaaatagtactgccaagcgatattttcggtgaagaaagaaaa
aattccaagggactcaacatgaacatcatctctgaatctgagccatttttcgcagctctc
gataaatttaaagacactacctggaacgcaggccctctggtcaatggcgagctattaagc
ggcgaaacaaatgaagttgtcagtccctacgacacgactcaagtagtgggtaagctggct
ttcgctaataaccaggccatagagcaggccctcacaggcgcagatgctgcttttagtggc
tggtgtaatacgcctgtagaagtacgagcaaatgcactacagaagcttgcggacctacta
gaagagaatcgtgaagagcttatcgccctttgtacccgagaagcgggcaagagtattcaa
gatggtatcgatgaagtacgtgaagcggtagatttctgtcgctattacgccgttcaagcc
aagaagatgatggctcagcctgaacttcttcctggcccaacgggtgaactgaatgaattg
ttcctccaaggccgcggtatcttcgtctgtattagcccgtggaacttccctctggccatc
ttcttaggtcaagttgccgcagcgcttgccgcgggtaataccgttgtcgctaagcctgcc
gagcaaacatctatcgtaggtttccgtgcggtacaactggcacaccaagcgggtattcct
aaagatgtactgcaattcctaccaggtactggtgcaactgttggcgcagcaatcacttca
gatgaacgcattgctggtgtttgttttaccggttctacgggcacggctaaactgattaac
cgcacattggcaaaccgtgaaggtgccatcattccactgatcgctgagacaggtggtcaa
aatgctatggttgtggattcaacatctcagcctgagcaagtggtcaacgatgtagttgct
tcatcattcaccagtgccggtcaacgttgttcagccctgcgtgtcctcttcctccaggaa
gatatcgcagatcgcgtactcgaagtgctgaaaggtgccatggacgaactaagcataggt
aatcctagctccatcaagactgatgtaggcccagtgatcgatgcaatggctaaagcaaac
ctaaatgctcatatcgaccatatcaaacaggtcggaactttgcttaagcaattagagctg
cctgctggaacagataagggtcacttcgttgctccgactgcggtagaaatagattcaatt
aaggtattggagaaggagcacttcggtcctatcctgcatgttattcgctacaaggcttcc
gagctggctaaggtgatcgatgagatcaacagcacaggcttcggtctgaccttaggcatc
cacagccgtaacgaaggacatgctctgaaaattgctagcaaggtcaacgtaggcaacgtc
tatatcaaccgtaaccaaattggcgcggttgttggcgttcaacctttcggtgggcaaggc
ctgtcgggcactggtcctaaggccggtggaccacactacctgactcgcttcatcacagag
aaaacccgcaccaataacatcaccgccataggtggtaatgcgacattattgtcattgggt
gacagcgacgagtaa

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