Shewanella violacea: SVI_1125
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Entry
SVI_1125 CDS
T01206
Symbol
thiI
Name
(GenBank) thiamine biosynthesis protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
svo
Shewanella violacea
Pathway
svo00730
Thiamine metabolism
svo01100
Metabolic pathways
svo01240
Biosynthesis of cofactors
svo04122
Sulfur relay system
Module
svo_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SVI_1125 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SVI_1125 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_1125 (thiI)
Enzymes [BR:
svo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
SVI_1125 (thiI)
Transfer RNA biogenesis [BR:
svo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SVI_1125 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
BAJ01096
UniProt:
D4ZHE7
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All DBs
Position
1317898..1319352
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AA seq
484 aa
AA seq
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MKFIVKLFPEIMMKSKPVRMRFTKMLETNIRNVLKKVDETAKVKREWDKIMVMVPSDRPD
LIDAFGERLSCIPGIAHILQVNESTFESMDDIYQQTLALYKDDLAGKTFCVRAKRVGNHD
FKSIEVERYVGGGLNQFTEAKGVKLKNPDMTINLEIDRENLYLVVKRIPGLGGFPMATQE
DVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEIGVKQVAYHLWQKYGESHKVK
FISVPFDPVVTEILEKIDNGQMGVILKRMMMRAATKIANKMGIQALVTGEAMGQVSSQTL
TNLNVIDRCTEQLILRPLIAMDKQDIINLSRVIGTEDLSKSIPEYCGVISQKPTVKAVLA
KIEAEELKFSEDLIERVIDAAVIIDIREIAKSVDEQIAQTKTVNSVDSSEVIIDVRSPEE
EERAPLKVDGVEIKTIPFFRLSTQFADLAKDKTYLLYCDRGVMSKLQALYLQEQGYENVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcgtaaaattgttccccgaaatcatgatgaaaagcaaaccggtaagaatg
cgttttaccaaaatgcttgaaaccaatatccgtaacgtacttaagaaagtcgatgagact
gccaaggttaagcgcgaatgggataaaatcatggtgatggtaccaagcgatagacccgat
ctgattgatgcatttggggagcgtttatcctgcattccgggtattgcccatatactgcag
gtcaatgagagcacgttcgagtcgatggatgatatctaccagcagacattggccttatat
aaggacgatcttgcgggtaagacattctgtgttcgtgctaaacgtgtgggtaaccatgat
ttcaagtcaattgaagttgaacgttatgtgggtggcggcttaaatcagttcaccgaggct
aagggcgttaaactcaagaatcccgatatgacgatcaacttagagatcgacagagagaat
ctttatctggttgttaagcgtattcctggtctgggcggctttcctatggcgactcaggaa
gatgtgctttcactcatttctggtggtttcgattccggtgtctctagttatcagttcatc
aagcgtggttccagaacccattactgtttcttcaacctaggtggcgaccaacatgagata
ggtgttaagcaagtggcttatcatctgtggcagaagtatggtgagtcacacaaggtgaag
tttatctcggtgccgttcgatcctgtggtgactgaaattctggaaaaaattgataacggt
cagatgggcgttattctcaagcgtatgatgatgcgtgcggccactaaaatcgccaataaa
atggggattcaggccctggttactggtgaagctatggggcaagtgtctagccaaactttg
actaacctcaatgtcatcgaccgctgtaccgaacaacttatccttcgtcccttaattgcc
atggataagcaagatatcatcaatctcagccgtgtgattggcactgaagatttatctaaa
tctattcctgagtactgtggcgttatctcacaaaaacctacggtgaaggctgtccttgcc
aagatcgaagccgaagagcttaaattctctgaagatcttatcgagcgtgttatcgatgct
gcagtgatcatcgacatacgcgagatagccaagagtgttgatgagcagatagcgcaaaca
aaaaccgtgaactcagtcgattccagtgaagttatcatcgacgtcagatcgccggaagag
gaggagcgagctccactcaaggtggatggtgttgaaattaaaactattcctttctttaga
ctgtcgacacaatttgccgatttagctaaagataagacctatctgctctattgtgatcgt
ggcgtcatgagtaagctgcaagcgctttatcttcaagagcaaggctatgagaacgtaaag
gtatatcgtccataa
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