Shewanella violacea: SVI_4060
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Entry
SVI_4060 CDS
T01206
Symbol
dfp
Name
(GenBank) DNA/pantothenate metabolism flavoprotein
KO
K13038
phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:
4.1.1.36
6.3.2.5
]
Organism
svo
Shewanella violacea
Pathway
svo00770
Pantothenate and CoA biosynthesis
svo01100
Metabolic pathways
svo01240
Biosynthesis of cofactors
Module
svo_M00120
Coenzyme A biosynthesis, pantothenate => CoA
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
SVI_4060 (dfp)
Enzymes [BR:
svo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.36 phosphopantothenoylcysteine decarboxylase
SVI_4060 (dfp)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.5 phosphopantothenate---cysteine ligase (CTP)
SVI_4060 (dfp)
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Gene cluster
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Motif
Pfam:
DFP
Flavoprotein
Herpes_US12
Motif
Other DBs
NCBI-ProteinID:
BAJ04031
UniProt:
D4ZDX0
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All DBs
Position
4656192..4657421
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AA seq
409 aa
AA seq
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MSQSKTPSQNNKNILLAIGGGIAAYKSADLIRRLKERGFDVRVVMSQSAKEFITPLTLQA
LSGYPVASDLLDTTAEAAMGHIELARWADLVIVAPATANLIARINAGMADELITTTCLAT
EAQVILCPAMNQQMYRNQATQDNLANLAKRGLKIWGPASGSQACGEIGPGRMLEPLDIVA
LAVQFFAPKLLAGHSLLLTAGPTREAIDPVRYISNHSSGKMGFAIAKAAADMGAQVTLIA
GPVNLATPLGVKRVDVISTQDMLEAVMSRVDTHDIFIGCAAVADYRVADIATDKIKKSSN
DMQLALIRNPDILATVASHNPRPFTLGFAAETQDVERYARDKLVRKKLDMIAANDVSNPE
LGFNADNNALKVIWAKGQKDLPPTDKQTLASQLLGILAERIAILKDDKK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagtaagaccccaagtcagaacaataaaaatatcctactcgctataggcggc
ggaattgcggcctacaaatcagccgatcttatccgacgcctcaaagagcgtggctttgac
gtccgtgtagtcatgagtcagagcgcgaaggaatttatcacaccgcttaccttacaagcc
ttatccggatatccggtggcatcggatctactcgatactacagctgaagcggccatgggg
catatagaactggctcgctgggcagaccttgtcattgtcgctccggcgactgctaacctg
atcgcacgaataaatgcaggtatggccgatgaacttataaccacgacgtgcttagctacc
gaagcccaggtaatactctgcccggctatgaatcagcaaatgtatcgcaatcaggcgacc
caggataacttagcaaacctagccaaacgcggtcttaagatttggggacccgcatcgggt
agccaagcctgtggcgagattggcccgggacgcatgctcgaacctttagatatcgtcgct
ctggcagtgcagtttttcgcaccaaaattacttgcgggccactctctattactaacagcc
ggaccgacaagggaagccatcgaccctgtacgttatatctccaaccatagctcgggaaag
atgggcttcgccatcgctaaagcggcagccgacatgggcgcccaggtcaccttaatcgcc
ggaccagttaacttggcgacacctttgggggtcaagcgagtcgatgtcatatcgactcaa
gacatgcttgaggcggtgatgagccgagtcgacactcatgatatcttcataggttgcgcc
gctgttgccgattatcgagtggcagatatagcaacagataagataaaaaaatcatccaat
gatatgcagcttgccttgataagaaatcctgatatcttagccaccgttgccagtcataac
cccagaccctttaccttaggtttcgccgccgagacccaagatgtcgaacgctacgctaga
gataaactagtgcgtaagaagctcgatatgatagccgccaatgacgtgtctaatcctgaa
ctcggtttcaatgcagacaataatgcactcaaggtcatttgggccaagggccaaaaagat
cttccaccgaccgataaacaaaccttagctagccaattactcggcatcctagccgaacgc
atagccattttgaaagatgataaaaaatga
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