Streptomyces viridifaciens: CP971_18880
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Entry
CP971_18880 CDS
T06960
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
svr
Streptomyces viridifaciens
Pathway
svr00860
Porphyrin metabolism
svr01100
Metabolic pathways
svr01110
Biosynthesis of secondary metabolites
svr01120
Microbial metabolism in diverse environments
svr01240
Biosynthesis of cofactors
Module
svr_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
svr_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
svr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CP971_18880 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svr04147
]
CP971_18880 (hemB)
Enzymes [BR:
svr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
CP971_18880 (hemB)
Exosome [BR:
svr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CP971_18880 (hemB)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QEV01036
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All DBs
Position
4310329..4311315
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AA seq
328 aa
AA seq
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MSAEFPYVRPRRLRQSPAMRRLVAETRLHPAELILPAFVSEGIAEPRPITSMPGVLQHTR
DSLRKAAVEAAEAGVGGIMLFGLPEVKDAVGSEGTNPDGILQQAIRDVVAEVGDRLVVMS
DLCLDEFTDHGHCGVLAEDGSVDNDATLARYAEMAVVQAEAGVHVVGPSGMMDGQIAVIR
RALDEAGHQDVSVLAYTAKYASALYGPFREAVNSSLKGDRKTYQQDPANAREALRELELD
LAEGADLVMVKPAMLYLDVLRQVADASPVPVAAYQISGEYSMVEAAAANGWIERERTILE
TLTSIRRAGAEQILTYWAVEAARMLKQQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgctgaattcccgtacgttcgcccccgccgtctgcgccagagcccggcgatgcgc
cggctggtcgccgagacccggctgcacccggcggagctgatcctgcccgccttcgtcagc
gagggcatcgccgagccgaggccgatcacctcgatgccgggcgtgctccagcacacccgg
gacagcctgcggaaggccgcggtggaggccgccgaggcgggcgtgggcggcatcatgctc
ttcggcctgcccgaggtgaaggacgccgtcggctccgagggcaccaatccggacgggatc
ctgcagcaggccatccgcgacgtggtcgcggaggtcggcgaccggctggtggtcatgtcc
gacctctgcctggacgagttcaccgaccacgggcactgcggcgtgctggccgaggacggc
agcgtggacaacgacgcgaccctggcgcgctacgccgagatggccgtggtccaggccgag
gccggcgtccacgtggtcggcccgtcggggatgatggacggccagatcgccgtcatccgc
cgggcgctggacgaggccgggcaccaggacgtcagcgtcctcgcctacacggccaagtac
gcctccgcgctgtacggccccttccgcgaggccgtcaactcctcgctcaagggcgaccgc
aagacctaccagcaggacccggcgaacgcccgcgaggcgctgcgcgagctggagctggac
ctcgccgagggcgcggacctggtgatggtcaagccggccatgctgtacctggacgtcctg
cggcaggtcgccgatgcctcgccggtgccggtggccgcgtaccagatctccggcgagtac
tcgatggtggaggcggccgccgccaacggctggatcgagcgggagcgcaccatcctggag
acgctcacctcgatccgccgggccggtgccgagcagatcctcacctactgggcggtcgag
gccgcccggatgctcaagcagcagtag
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