Setaria viridis (green foxtail): 117842269
Help
Entry
117842269 CDS
T07951
Name
(RefSeq) probable sarcosine oxidase
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00260
Glycine, serine and threonine metabolism
svs00310
Lysine degradation
svs01100
Metabolic pathways
svs04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117842269
00310 Lysine degradation
117842269
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117842269
Enzymes [BR:
svs01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
117842269
1.5.3.7 L-pipecolate oxidase
117842269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
HI0933_like
NAD_binding_8
FAD_oxidored
GIDA
Amino_oxidase
FAD_binding_2
FAD_binding_3
Pyr_redox_2
3HCDH_N
Thi4
Motif
Other DBs
NCBI-GeneID:
117842269
NCBI-ProteinID:
XP_034578549
LinkDB
All DBs
Position
2:complement(35138174..35140796)
Genome browser
AA seq
409 aa
AA seq
DB search
MAASNGEAVHGRFDVIVVGAGIMGSCAAYAASSRGARALLLERFDLLHHRGSSHGESRTI
RATYPQPHYPPMARLSRRLWEEAQADAGYRVLTPTPHLDLGPRDDPALRASIRNGGAAEV
AASWPWAGVFRVPEGWTAATSELGGVMKATKAVAMFQALAVRKGAVVRDRTEVVDIAKPA
DGSILVRTASGEEFHGAKCIVTVGAWTSKLVKSVIGMDLPVQPVQTLICYWKVKPGHESE
LTTEAGFPTFASYGDPYIYSTPSMEFPGLIKIAKHGGPPCDPDSRDWSTGAADLAEPVAR
WIDAFMPGHVDTAGGPVIRQSCMYSMTPDEDYVIDFLGGEFGKDVVVGAGFSGHGFKMGP
AIGRILAEMAMDGEARTAAEAGVDLQPLRIDRFVDNPKGNLKNPGDQDK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccaacggcgaggccgtccacggccggttcgacgtgatcgtggtgggcgcg
ggcatcatgggcagctgcgcggcgtacgcggcgtcctcccgcggcgcgcgcgcgctgctc
ctggagcggttcgacctgctccaccaccggggctcctcgcacggcgagtcccgcaccatc
cgcgccacctacccgcagccgcactacccgcccatggcgcgcctctcgcggcgcctctgg
gaggaggcccaggccgacgccggctaccgcgtgctcacgcccacgccgcacctcgacctg
ggcccgcgggacgaccccgcgctccgcgcctccatcagaaacggcggcgccgccgaggtc
gccgcgtcctggccgtgggcgggcgtgttccgggtgccggaagggtggacggcggccacc
agcgagctcggcggggtgatgaaggcgaccaaggcggtggccatgttccaggcgctcgcc
gtcaggaagggcgccgtcgtcagggaccggacggaggtggttgacatcgccaagccagcg
gatggatcaatcttggtgaggacagcgagtggcgaggaattccatggcgccaagtgcatc
gtaacggttggcgcatggacaagcaagctggtcaagtcagtcatcggcatggacctgccg
gtgcagccggtgcagacgctcatctgctactggaaggtgaagcccggccacgagagcgag
ctcaccacggaggccggcttcccgacgttcgccagctacggtgacccctacatctacagc
acgccgtcgatggagttcccgggcctcatcaagatcgccaagcacggcggcccgccgtgc
gacccggacagcagggactggtccacgggcgccgccgacctggcggagcccgtagcccgg
tggatcgacgccttcatgccgggccacgtcgacaccgccggcgggccggtcatccggcag
tcgtgcatgtactccatgacgcccgacgaggactacgtgattgacttcctcggcggggag
ttcgggaaggacgtcgtcgtcggcgcggggttctccggccacgggttcaagatggggccg
gctatcgggaggatcctggcggagatggccatggatggggaggcgaggacggcggcggag
gctggagtagacctccagcccttaaggatcgatcggtttgttgacaatccaaagggaaac
ctcaagaatcctggagatcaggacaaataa
DBGET
integrated database retrieval system