Setaria viridis (green foxtail): 117843668
Help
Entry
117843668 CDS
T07951
Name
(RefSeq) succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial
KO
K01899
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00020
Citrate cycle (TCA cycle)
svs00640
Propanoate metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
Module
svs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
svs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
117843668
00640 Propanoate metabolism
117843668
Enzymes [BR:
svs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
117843668
6.2.1.5 succinate---CoA ligase (ADP-forming)
117843668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-GeneID:
117843668
NCBI-ProteinID:
XP_034580223
LinkDB
All DBs
Position
2:42882857..42887953
Genome browser
AA seq
332 aa
AA seq
DB search
MAAASSRRASQLLGSAASRLLHARGFAAAAAAAPSPAVFVDKSTRVICQGITGKNGTFHT
EQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEA
MEAELDLVVCITEGIPQHDMVKVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHK
PGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVDDPQTEGI
VLIGEIGGTAEEDAAAFIQESKTQKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKI
KALREAGVTVVESPAKIGSTMFEIFKQRGMVE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcctcccgccgcgcgtcgcagctgctggggtccgccgcctctcgcctc
ctccacgcgcggggcttcgccgcggcggccgccgccgcgccctcgccggcggtcttcgtc
gacaagagcacccgcgtgatctgccagggcatcacggggaagaacggcaccttccacacc
gagcaggccatcgagtacggcaccaacatggtgggtggagtgactcctaagaaaggtgga
actgaacatttagggctcccagtgtttaactccgtagcagaggctaaggctgaaacaaaa
gccaatgcatctgttatatatgttccgccaccatttgccgccgctgctataatggaggca
atggaggctgagctcgaccttgttgtctgcattacagaaggaattcctcagcatgacatg
gtgaaagtgaaggctgcactaaacaggcagtcaaaaactcgattgatcgggccaaattgc
cctggtatcattaagcctggtgaatgtaaaattggaatcatgcctggttacatccacaag
ccagggcgtgttgggattgtatctcgttctggtaccttgacatatgaagcggtgtttcaa
acaacagctgtaggtctggggcagtcaacttgtgtaggcattggtggtgacccattcaat
ggcacgaattttgttgattgccttgaaaagtttgttgacgatcctcagacagaaggtatt
gttctcattggtgaaattggaggtactgctgaggaggatgctgcagcattcatccaggaa
agcaaaacacaaaagcctgttgttgcattcattgctggacttacggcacccccgggtcgt
cgcatgggtcatgctggagcgattgtgtcaggaggaaagggtacagcccaggacaaaatc
aaggcactccgagaggctggtgtgactgtcgtggagtcgccagcaaaaattggttctacc
atgtttgaaatcttcaagcagcgtggaatggtagagtag
DBGET
integrated database retrieval system