KEGG   Setaria viridis (green foxtail): 117844779
Entry
117844779         CDS       T07951                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03020  RNA polymerase
svs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117844779
  09124 Replication and repair
   03420 Nucleotide excision repair
    117844779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svs03021]
    117844779
   03400 DNA repair and recombination proteins [BR:svs03400]
    117844779
Transcription machinery [BR:svs03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117844779
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117844779
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C zinc_ribbon_4
Other DBs
NCBI-GeneID: 117844779
NCBI-ProteinID: XP_034581456
LinkDB
Position
2:complement(44305024..44307790)
AA seq 114 aa
MSALKFCRECNNMLYPREDKETRTLLYACQSCEHQEVASDTCVYKRVLRKPSGEPKDVLK
DVAADPSLPRTRSVRCYNCNHPEAAFFQAPTKGEKAMTLYFICCNPSCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagcgctctcaagttctgccgcgaatgcaacaacatgctgtacccgcgggaggacaag
gagacccgcaccctcctctacgcttgccagtcctgcgagcatcaggaggttgcttcagat
acttgtgtgtacaaaagggttcttcgtaagccttctggtgaacccaaagatgtcctgaag
gatgtagcagctgatcctagcctgcctcgcaccagaagtgttagatgctacaactgcaac
catccagaagctgcttttttccaggccccaactaagggagagaaagccatgacgctgtac
ttcatctgctgcaacccgagctgtggccacaggtggagggactga

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