Setaria viridis (green foxtail): 117844950
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Entry
117844950 CDS
T07951
Name
(RefSeq) solanesyl-diphosphate synthase 1, mitochondrial
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00900
Terpenoid backbone biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117844950
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
svs01006
]
117844950
Enzymes [BR:
svs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
117844950
Prenyltransferases [BR:
svs01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
117844950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
117844950
NCBI-ProteinID:
XP_072148170
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All DBs
Position
2:7058116..7063793
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AA seq
393 aa
AA seq
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MMLPGRLLLAGLLRSASTASSAPRMPTNMCYWDRFTWSSCYFHSTSDHSSRKAGLTAKEQ
LDPFVLIKDEVSEVTDRLRSMVVAEVPELTSAAGYFFRAGAEGKRTCPTVLLLMASAISM
DIADGLENKPRARHMHLAEITEMIHISSLIHDDVLDDADTRRGMDSLNFKVGKKLAVLAG
DFLLFRAFSAAVSLDNTEVVSLLATAVNNLVTGELMQMSITPAQRCSMDYYLQKTYYKTA
ALISNSCKAIAVLAEQTTEVQALAYQYGRHLGIAYQLIDDILDFTGTSASLGKASLSDIH
QGIVTAPILFAMEEFPELHDIVEQGFDDPLNVKTALKYLSKSQGIERTRFLAAEHAKLAA
GAIDDLPDSEDQVLLNSRQALKDLTQKFMRRTK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgccgggacggcttcttctcgctgggctcctgcgctcagcctccaccgcttcc
tccgctccccgaatgccaacgaatatgtgctattgggacagatttacttggagttcatgt
tattttcacagcacaagtgatcattcttccagaaaagcagggctaacagctaaggagcag
ctagacccctttgtgctgattaaagatgaagtctctgaagtgacagatcgattgcgctca
atggtggttgctgaggtgcctgaactgacatcagcagctggatacttcttcagagctgga
gctgaagggaaaagaacttgtcctactgttctactgttgatggcttcagctataagcatg
gacatagctgatggcttagagaataagcctcgagcaaggcatatgcatcttgctgagata
actgaaatgattcatatatcgagccttattcatgatgacgttttggacgatgctgatact
aggcgtggcatggactcattgaacttcaaagtggggaagaaacttgcagtattggctggc
gatttcctacttttcagggcattttctgcagctgtgtctcttgacaatactgaggttgta
tcattactagcaactgctgtaaataatcttgttactggtgagcttatgcagatgtcaata
actccagcacagcgctgcagcatggactattatttgcagaagacatactacaagacagct
gcattgatttcaaacagctgcaaagctattgctgtccttgctgagcaaacaacagaagta
caagctcttgcttatcagtatggcagacacttgggcatagcatatcagttgatcgatgac
atccttgatttcacaggcacatcagcttcactaggcaaagcctccttgtctgatatccat
cagggaattgtgacagctcccatactttttgcgatggaagaattccctgaactgcatgac
attgttgaacagggatttgatgaccctttaaatgttaagacggccctcaaatacctttca
aaaagtcagggaatcgagaggacgaggtttcttgctgctgaacatgcaaaactggcagcg
ggcgctatcgatgatcttcctgatagtgaggatcaagtgttgcttaactcgaggcaagcg
ctcaaagatcttactcaaaagttcatgagaagaacaaagtga
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