Setaria viridis (green foxtail): 117846878
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Entry
117846878 CDS
T07951
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00906
Carotenoid biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
117846878
Enzymes [BR:
svs01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
117846878
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
Pyr_redox
FAD_binding_2
NAD_binding_8
FAD_oxidored
FAD_binding_3
HI0933_like
Pyr_redox_3
NAD_binding_9
3HCDH_N
GIDA
Motif
Other DBs
NCBI-GeneID:
117846878
NCBI-ProteinID:
XP_034583880
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Position
1:5129521..5131260
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AA seq
495 aa
AA seq
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MAATALLLRTHHQPCKPPPPPPPAARAAVLCRAAAGTSAGPASAAALRSLAPPTQPELLS
LDLPRYDPSRARPVDLAVVGGGPAGLAVAQRVAEAGLSVCAIDPSPALVWPNNYGVWVDE
FEAMGLSHCLDTVWPSASVFIGDGASPKSLDRPYARVARRKLKSAMMDRCVANGVVFHQA
KVAKAVHHDASSLLICDDGVAVPATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDG
HPFDIDKMLFMDWRDSHLPEGSEIKERNRRIPTFLYAMPFSPTRIFLEETSLVARPGLAM
DDIQERMAARLRHLGIRVRSVEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMV
ARTLATAPIVADAIVRFLDTGGGAAGLTGDALSAEVWKQLWPANRRRQREFFCFGMDILL
KLDLEGTRRFFDAFFDLEPHYWHGFLSSRLFLPELLMFGLTLFGNASNTSRLEIMAKGTV
PLGKMIGNLIQDRDG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccgccctcctcctccgcacccaccaccaaccctgcaagccgccgccgccg
cctccccccgcggcgcgcgcagccgtcctctgccgcgccgcggcggggacgtccgccggg
ccggcgtcggccgcggcgctgcggtccctggccccgcccacgcagccggagctgctgtcc
ctcgacctcccccgctacgacccatcgcgcgcccgccccgtggacctcgccgtggtgggc
ggcgggcccgcgggcctcgccgtggcgcagcgcgtggcggaggccggactctccgtgtgc
gccatcgacccgtccccggcgctcgtgtggcccaacaactacggcgtgtgggtggacgag
ttcgaggccatgggcctctcccactgcctcgacaccgtctggccgtcggcgtccgtcttc
atcggcgacggcgccagccccaagtcgctcgaccgcccctacgcccgcgtcgcgcgccgg
aagctcaagtccgccatgatggaccgctgcgtcgccaacggcgtcgtcttccaccaggcc
aaggtcgccaaggccgtccaccacgacgcctcctccctcctcatctgcgacgacggcgtc
gccgtcccggccaccgtcgtgctcgacgccacggggttctcccgctgcctcgtgcagtac
gacaaaccatataaccccggctaccaggtcgcctacggcatcctcgccgaggtcgacggc
cacccgttcgacatcgacaagatgctcttcatggactggcgcgactcgcacctcccggag
gggtcggagatcaaagagcgcaaccgccgcatccccacgttcctctacgccatgcccttc
tcgcccacaaggatcttcctcgaggagacgtccctcgtcgcgcgcccgggcctcgccatg
gacgacatccaggagcgcatggctgcgcggctcaggcacctggggatacgcgtccggagc
gtcgaggaggacgagcggtgcgtcatccccatgggcgggccgctgcccgtgctgccgcag
agggtcgtcggcatcggcggcacggccgggatggtgcacccgtccacggggtacatggtg
gcgcgcacgctggcgaccgcgccaatcgtggcggacgccattgtgcggttcctcgacacc
ggcggcggcgcggcgggactcaccggggacgcgctctccgccgaggtgtggaagcagctg
tggccggccaacaggcggcggcagagggagttcttctgcttcggcatggacatcctgctc
aagctcgacctcgaggggacgcgccgcttcttcgacgccttcttcgacctcgagccgcac
tactggcacggcttcctgtcgtccaggctgttcctgccggagctcctgatgttcgggctc
acgctgttcgggaacgcctccaacacgtccaggctcgagatcatggccaagggcaccgtg
cctcttggcaagatgattggcaacttgatacaggacagagatgggtga
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