Setaria viridis (green foxtail): 117847672
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Entry
117847672 CDS
T07951
Name
(RefSeq) beta-galactosidase 8 isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00052
Galactose metabolism
svs00511
Other glycan degradation
svs00531
Glycosaminoglycan degradation
svs00600
Sphingolipid metabolism
svs00604
Glycosphingolipid biosynthesis - ganglio series
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
117847672
09103 Lipid metabolism
00600 Sphingolipid metabolism
117847672
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117847672
00604 Glycosphingolipid biosynthesis - ganglio series
117847672
00511 Other glycan degradation
117847672
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117847672
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
117847672
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117847672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
OxoDH_E1alpha_N
Motif
Other DBs
NCBI-GeneID:
117847672
NCBI-ProteinID:
XP_034584808
LinkDB
All DBs
Position
3:11703861..11711958
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AA seq
675 aa
AA seq
DB search
MASSGTFQNLLLAPLLCLALASSVGGEASSSRRFWIENDTFMKDGAPFQIVGGDVHYFRI
VPEYWKDRLLRAKALGLNAIQTYVPWNLHEPEPQSWEFKGFADIESYLRLAQELDMLVML
RVGPYICGEWDLGGFPPWLLAIEPALKLRSSDSTYLSLVERWWGVLLPKVAPLLYNNGGP
VIMVQPVWQIENEFGSFGDDKNYLHYLVQLARRYLGNNIVLYTTDGGAIGNLKNGSIPQD
DVFAAVDFGTGSNPWPIFRLQKKYNLPGKSAPLSSEFYTGWLTHWGESIATTDAASTAKA
LKTILCHNGSAVLYMAHGGTNFGFYNGANTGQDESDYKADLTSYDYDAPIKEHGDVHNSK
YEALRRVIHKCTRTPLHPLPSDIEKANYGLVKLQKVASLFDIIDNISDPLKGAVSEHPLY
MEQIGQMFGFLLYMSEYQGKLPSSILSIPKVHDRAQVFLSCSTDGIRNPRYAGIIERWSS
ETLEIPNLRCSSNTSLYILVENMGRVNYGPYIFDRKGILSPIQIDGITLRHWKMYPLTFS
SLDNLPKLQLITQMPDVRDSKVSIIHGDSEKKLQESSFYSNEPEFYEGHFHIDSESEIKD
TFISFRGWNKGVAFVNNFNIGRFWPARGPQCALYVPAPILRPGDNTIVIFELHGPNPELT
INLVTDPDFTCGPNQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagtggaacctttcagaaccttctcctggcgcccctcctctgcctcgcgctc
gcctcgtcggtcggtggcgaggcgtcgtcgtcaagaaggttctggatcgagaacgatacc
ttcatgaaggatggggcgccgttccagatcgtcggcggggacgtgcactacttccgcatt
gttcctgagtactggaaggatcgcctgttaagagcaaaggcgctgggcttgaacgcaatt
caaacatatgtaccttggaacttgcatgagccagaaccacagagctgggaattcaagggc
tttgcagatattgaatcatatctgagacttgctcaagaattagatatgttggtcatgctt
cgtgtaggtccatacatttgtggagaatgggatttaggaggatttccaccttggttgctc
gccatagaacctgcccttaaactacgatcatcagattcgacctatctttccttggtggag
agatggtggggtgtactacttccaaaagttgcaccattattgtacaacaatggaggtcca
gttattatggttcagccggtctggcagattgaaaatgaatttggttcatttggagatgac
aagaattaccttcattaccttgttcaactggccagaagatatcttgggaacaacattgtt
ctttatacaactgatgggggcgccattggtaatttaaagaacggatcaattcctcaagat
gatgttttcgctgctgttgattttggaactgggtccaatccatggcccatattcagatta
cagaagaaatacaacttaccaggaaaatcagctcctttaagttcggaattttatactgga
tggctaacacactggggtgaaagtatagcaacaacagatgccgctagtacagctaaagcc
cttaaaacaattttgtgccacaatggttctgctgtactttatatggctcatggtgggacc
aattttgggttttataatggtgcaaatactggccaagatgaatcagattacaaggcagat
ctcacttcatatgactatgatgcaccgattaaggagcatggagatgtacataattcaaaa
tacgaagcactgagaagggtaatacataaatgtactcggactcctcttcatccacttcct
tctgacattgaaaaggcaaattacgggcttgtgaagttacagaaggttgcttctttgttt
gacatcattgataatatcagtgatcctttgaaaggtgctgtttctgagcatccactgtat
atggaacagataggccagatgtttggatttctattgtacatgtcagaataccaagggaaa
ctcccatcaagcatcctatcaattccaaaggtacatgacagagctcaggtgttcctgtca
tgctcaactgacggtatcagaaacccaagatatgctggtataattgaaagatggtctagt
gaaacactagaaataccaaatttaagatgttcttctaataccagcctatatatcctggta
gaaaatatgggtcgtgtaaattatgggccatatatttttgaccggaagggaatactatct
cctattcaaatagatggcatcactctccgtcactggaaaatgtatccacttacatttagt
tcactggataaccttccaaaactccaactaatcactcaaatgcctgatgttagagatagt
aaagtgtccattattcatggtgactcagaaaagaaattgcaggagtcatcattctattca
aatgaacctgaattttatgaaggccatttccatatcgactcggagagtgagataaaggat
acatttatatcatttcgtggttggaacaagggtgttgcttttgtgaacaacttcaacatt
gggagattttggccggctcggggaccacagtgtgccctttatgttcctgctccgatcctc
agacctggagacaacactattgtaatctttgaactgcacggtccgaatcctgaactcaca
atcaacttagtaacagatccagatttcacatgcggtccaaatcagtaa
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