KEGG   Setaria viridis (green foxtail): 117848593
Entry
117848593         CDS       T07951                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03020  RNA polymerase
svs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117848593
  09124 Replication and repair
   03420 Nucleotide excision repair
    117848593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svs03021]
    117848593
   03400 DNA repair and recombination proteins [BR:svs03400]
    117848593
Transcription machinery [BR:svs03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117848593
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117848593
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C CpXC
Other DBs
NCBI-GeneID: 117848593
NCBI-ProteinID: XP_034585947
LinkDB
Position
3:42664521..42666214
AA seq 114 aa
MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ
DVAGDPTLPRTKDVRCAVCGHGEAVFFQATVRGEEGMTLFFVCCNLSCGNRWRE
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaagttttgccgtgaatgcaacaacatcctgtacccaaaggaggaccgg
gagcagaaggtgctcctctacgcctgccggaactgcgaccatcaggaggttgcggacaac
aactgcgtgtaccggaacgtggtgcaccacagcgccggcgagttcacccaggtgctccag
gacgtcgccggcgaccccactctgccccgcaccaaggacgtgcgctgcgccgtctgcggc
cacggcgaggccgtcttcttccaggccaccgtgaggggtgaggaggggatgacgctcttc
ttcgtctgctgcaacctcagctgcggcaaccgctggagagagtga

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