Setaria viridis (green foxtail): 117849852
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Entry
117849852 CDS
T07951
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117849852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117849852
Enzymes [BR:
svs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117849852
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
117849852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
117849852
NCBI-ProteinID:
XP_034587458
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All DBs
Position
1:170250..185703
Genome browser
AA seq
1154 aa
AA seq
DB search
MTVPPPGDDAAKKDKDVPPPSYRSLAAPVANPVDKFALLPAFLKVRGLVKEHIDSFNYFI
TRGIRNIIQANNRIEARNDPNIYLRYTNVHVGTPSVQVDYKVEEITPHFCRLTDRTYSAP
IKVDIEYTVGKQHELQFKRNVLIGYMPIMLRSYACILHGKDEAELARLGECPLDPGGYFI
VKGTEKVILIQEQLSKNRIIIDTDSKGRVIASVTSSTHEIKSKTVITLDKEKIYLQLNQF
TKPIPIIVVMKAMGMESDQEVVQMVGRDPRYGDLLFPSIQECASERIYTQQQALQYMDEK
VTYPGAGNQKEGRSKSILRDVFIAHVPVKNGNFRQKCIYTGVMLRRMMDAILNANTFDDK
DYVGNKRLELSGQLISLLFEDLFKTMNSQAVELMNKNSDKTRSSPSDFSQLIKHESITSG
LERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPS
QWGMLCPCDTPEGEACGLTKNLALLTHVTTDQEEGPLMNLCKSLGVEDLSLLSGEEIHAP
GSFLVMFNGLILGKHRQPQTFANAMRNLRRSGKIGEFVSIFVNEKQHCIHIASDGGRVCR
PLIIADKGISRVKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNALIALYEHVDQDDV
ERSSITHIEIEPLSILGVVSGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLL
YLLVYAQRPLLTTKTIELVGYDKLGAGQNATVAVMGYSGYDIEDAIVMNKSSLDRGFGRC
IAMKKYTVIKEYYGEGVSDRIAKPQRDKDGALVKQNMRALDEDGIAAPGQIIRNHDVYVN
KQSPKVIDRRGAGAPLMDRDYKDSPAIYKGVDGETTVVDRVMLCSDTNEKLSIKCIIRHT
RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELIG
GKAGVSCGRFHYGSAFGEPSGNADKVEDISNTLIKHGFSYNGKDFLYSGILGHPLEAYIF
MGPIYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASML
IFERLLLSSDPYQVQVCRKCGLLGYYNYKLKTSYCSMCKNGENMAKMRLPYACKLLFQEL
QSMNVVPRLKLTEG
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgacggttccccccccaggcgacgatgcggccaaaaaggacaaggatgtgcctccaccg
tcctaccgctcgctggccgcgccggtcgccaaccccgtcgacaagttcgcgctcctcccc
gcattcctcaaggtccgagggctcgtcaaggagcacatcgactccttcaactacttcatc
accaggggaatcaggaacatcatccaggcaaacaatcggattgaggcccgcaatgaccca
aacatctaccttaggtacacaaacgtccatgttggcacgccctcagttcaagttgattac
aaagtcgaagaaatcacgccgcacttttgccgccttactgaccgcacttattctgctcct
ataaaagttgatatcgaatataccgtcgggaagcagcatgagctgcagtttaagaggaac
gttctcattggctacatgcccattatgcttagaagttatgcatgtattctgcatggaaag
gatgaagctgaactagcaagactcggtgaatgccctcttgatcctggtggctacttcata
gtcaaaggaactgagaaggtcattctaatacaagaacagctatcgaagaatcgtattatt
atagacaccgatagtaaaggaagggtgattgcatctgttaccagcagcacacatgaaatt
aaaagcaagacggtgattactttggataaggagaagatctatctacagctgaatcaattc
acgaaaccgattccaataatagtggtcatgaaagctatgggaatggaaagtgatcaagag
gttgtacagatggttggaagagatccaagatatggagacctcctattcccatctattcag
gaatgtgcctcagagagaatatatacgcaacagcaagccctgcagtacatggatgagaag
gtcacatatcctggtgcaggaaaccagaaggagggtcgatcgaaatcaatcctacgtgat
gtgtttattgcacatgtgccggtcaagaacgggaacttccgacaaaaatgtatatacact
ggcgtaatgttaaggcgcatgatggacgcaatcttgaatgctaacacctttgatgataag
gattatgtagggaataagaggctggagctgtctggtcaactaatatccctgctttttgag
gatttgttcaaaacaatgaattcccaagctgtagagctcatgaacaaaaatagcgacaag
actcgttctagtccttcagatttcagccagttgataaagcatgaatccataacctctggt
ttggagagggctatttctacaggaaattgggatattaaacggtttaggatgcataggaaa
ggtgtgtcacaggttctttctaggctatcgtacatggcatcattaggctacatgacacgg
ataacaccacagtttgagaagacacggaaaacaagtgggccacgtgctttgcaacctagt
cagtggggtatgctttgcccatgtgatactcctgaaggagaagcttgtggattgacgaaa
aatttggctctattgactcacgttacaacagatcaagaggaaggcccgctgatgaatctg
tgtaaaagtcttggtgtggaagatttatcgcttctgtctggagaagaaatacatgcacca
ggttcttttttggtgatgttcaatggattaatactggggaaacacaggcagcctcagaca
tttgctaacgctatgagaaacttgcgtcgatcaggcaaaattggagagtttgtaagcatt
tttgtaaatgagaaacagcattgcattcacattgcctctgatggtggtcgtgtatgtcgc
ccacttataattgctgataaggggatatcaagggtcaaagagcatcatatgaaagaactg
agggatggtgttcgttctttcgatgattttctgcgtgatggattgatcgaatatcttgac
gtcaatgaagagaacaatgcattgattgcattgtatgagcatgtggatcaagatgatgtt
gaaagaagcagcatcacacacattgaaatagagccattgtctatcttaggagttgtatcc
ggacttattccttatccacaccataaccaatctccacgtaatacttatcagtgtgcgatg
ggtaagcaagcgatgggaaatattgcatataatcagttgttcagagcagattcactactc
tacttactagtgtatgcacaacgcccactgctaacaaccaaaacaattgaattggtggga
tacgacaagcttggtgctgggcagaatgccactgttgctgtcatgggttatagtggatat
gatattgaagatgcaattgtaatgaataaatcatcgcttgatcgaggtttcggtcgttgc
atagcaatgaaaaagtacacagttataaaggagtactatggagaaggtgtgtctgatagg
atcgctaaaccacaaagagataaagatggtgctttggtaaagcagaatatgcgggcactg
gatgaagatggcattgctgcacctggtcaaataattcgcaatcatgatgtctatgtgaac
aagcaatctcccaaagttatagatagaagaggtgctggtgcaccgttaatggacagggac
tacaaggactcaccggccatttacaaaggtgttgatggtgagactactgttgtagatcgt
gtaatgctttgttcagatacaaatgagaagctatctattaaatgcattatccgccataca
aggaggccagaggttggtgataaatttagtagcagacatgggcagaaaggtgtttgtggc
accattgttcagcaggaggacttccccttctctgagaggggaatatgccctgatttaatt
atgaatccacatggattccctagtcgtatgactataggtaaaatgattgaacttattggt
ggaaaggctggtgtatcttgtggtcgattccattatggcagtgcatttggtgaaccaagt
ggtaatgctgataaagtggaagacataagcaatactctaatcaagcatggcttcagctat
aatggaaaagatttcttgtactcaggcattctaggtcatcctctggaggcatacatcttc
atgggaccaatctactatcagaaactgaagcacatggttcttgataagatgcatgctcga
gctagtggaccacgagtgttgttaaccaggcagcctactgaagggcgaagtcgcgatgga
ggtctgcgtcttggtgaaatggaacgtgactgtttgattgcatatggtgcaagcatgctg
atctttgaacgtctacttctatccagtgatccatatcaagtccaggtttgcagaaaatgt
ggcttgctggggtactacaactataaacttaagacttcgtactgttcaatgtgcaagaac
ggggaaaatatggccaagatgaggctgccatatgcctgcaagcttttattccaggaattg
caatcaatgaatgttgttccacgattgaagctaaccgaaggatag
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