Setaria viridis (green foxtail): 117851673
Help
Entry
117851673 CDS
T07951
Name
(RefSeq) tryptophan synthase beta chain 2 isoform X1
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00260
Glycine, serine and threonine metabolism
svs00400
Phenylalanine, tyrosine and tryptophan biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01230
Biosynthesis of amino acids
Module
svs_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117851673
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
117851673
Enzymes [BR:
svs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
117851673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
117851673
NCBI-ProteinID:
XP_034589432
LinkDB
All DBs
Position
4:31923694..31926716
Genome browser
AA seq
498 aa
AA seq
DB search
MAAAAAATTTTLRPTLPQAGPEQRASLLCTPKHRVPAGGRRSLSFTARASLNSGAKVSIP
KQWYNLVADLPVKPPPPLHPQTHQPLNPSDLSPLFPDELIRQEVTDERFVDIPEEVIDVY
KLWRPTPLIRARRLEKLLGTPAKIYYKYEGTSPAGSHKPNTAVPQAWYNAAAGVKNVVTE
TGAGQWGSALSFASSLFGLNCEVWQVRASFDQKPYRRLMMETWGAKVHPSPSEATEAGRK
ILAADPTSPGSLGIAISEAVEVAATDAATKYCLGSVLNHVLLHQTVIGEECLEQLAALGE
APDIVIGCTGGGSNFGGLAFPFMREKLAGRMSPEFRAVEPAACPTLTKGIYAYDFGDTAG
LTPLMKMHTLGHGFVPDPIHAGGLRYHGMAPLISHVYELGFMDAVAIQQTECFQAALQFA
RTEGIIPAPEPTHAIAAAIREAMECKKTGEEKVILMAMCGHGHFDLAAYEKYLRGDMVDL
SHSADKLEASLAAVPKVR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgccgccaccaccaccacccttcgtcctaccctgccccaagcaggg
ccagagcaaagagcttcactgctctgcacgcccaagcacagggttcctgccggtgggagg
agaagcctgagcttcaccgcgagggccagtctgaactcaggcgccaaggtgagcatcccg
aagcaatggtacaacctcgtcgccgacctgccggtgaagccgccgccgccgctgcacccg
cagacgcaccagcctctgaatcccagcgacctgtcgcccctgttccccgacgagctgatc
aggcaggaggtcaccgacgagcggttcgtcgacatacccgaggaggtcatcgacgtctac
aagctctggcgcccgacgccgctcatcagggccaggaggcttgagaagctgctgggcacg
ccggcgaagatctactacaagtacgaggggaccagtccggcggggtcgcacaagcccaac
accgccgtgccgcaggcatggtacaacgccgcggcaggggtcaagaacgtcgtcaccgag
accggcgccggccaatggggcagcgctctctccttcgccagcagcctctttggcctcaac
tgcgaggtgtggcaggtgcgcgcgtcgttcgatcagaagccgtaccggaggctgatgatg
gagacgtggggcgccaaggtgcacccgtcgccgtcggaggcgacggaggccgggaggaag
atcctggcggcggacccgaccagccccggcagcctcgggatcgccatctcggaggccgtg
gaggtggcggccaccgacgccgccaccaagtactgcctgggcagcgtgctcaatcacgtc
ctgctccaccagaccgtcatcggcgaggagtgcctggagcagctggcggcgctcggcgag
gcgcccgacatcgtcatcggctgcaccggcggcggctccaacttcggcgggctcgcgttc
cccttcatgcgcgagaagctcgccggcaggatgagcccggagttcagggccgtggagccc
gcggcgtgccccacgctcaccaagggcatctacgcctacgacttcggcgacaccgccggg
ctcacgccgctgatgaagatgcacacgctcggccacggcttcgtccccgacccgatccac
gcaggtgggcttcgctaccatggaatggcacctctgatctcgcacgtgtacgagctgggc
ttcatggacgccgtcgccatacagcagactgaatgcttccaagcggcattgcaattcgcc
cggacggagggcattatcccggcgccagagccgacgcacgcgatcgcggcggcgatcagg
gaggcgatggagtgcaagaagaccggggaggagaaggtcatcctgatggccatgtgcggc
cacggccacttcgacctcgctgcgtacgagaagtacctgaggggcgacatggtcgacctg
tcgcactcggccgacaagctggaggcgtccctcgccgccgtgcccaaagtccgatga
DBGET
integrated database retrieval system
