Setaria viridis (green foxtail): 117856783
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Entry
117856783 CDS
T07951
Name
(RefSeq) peroxisomal fatty acid beta-oxidation multifunctional protein-like isoform X1
KO
K10527
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:
4.2.1.17
1.1.1.35
1.1.1.211
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00071
Fatty acid degradation
svs00592
alpha-Linolenic acid metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01212
Fatty acid metabolism
Module
svs_M00087
beta-Oxidation
svs_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
117856783
00592 alpha-Linolenic acid metabolism
117856783
Enzymes [BR:
svs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
117856783
1.1.1.211 long-chain-3-hydroxyacyl-CoA dehydrogenase
117856783
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
117856783
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Pyr_redox_2
F420_oxidored
NAD_binding_2
DAO
LD_cluster3
Motif
Other DBs
NCBI-GeneID:
117856783
NCBI-ProteinID:
XP_034595105
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Position
1:10510691..10529701
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AA seq
727 aa
AA seq
DB search
MASRPTMRVTMEVGADGVALITICNPPVNALHPAIFDGLSEKYGEAMARDDVKAIVLTGD
AGKFCGGFDINTFARIHQTGNMSLLPDSVKLASHMMEEGRKPSVAAIQGLALGGGLELTM
ACHARISTPEAQLGLPELTLGVIPGSGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERG
LIDALCSGDELIKMSRHWALEIASCRRTWTKSLGRTDKLGSPSEARALLSTTRQQVKKIS
TNMPQYQACLDVIEEGVLFGGHAGVLKEYKVFKELVPSQTSRSLVHVFLAQRSTTKVPGV
TNVQLKPRKTRKVAIIGGGLMGSGIATSLLISNISVVLKEVNPQFLQRGQKMIAANLEGL
VKRGSLTKDKINKAMSLLKGALDYSEFKDVDMVIEAVIENIPLKQSIFSDIEKICPPHCI
FATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITLGKI
IKKVPVVVGNCTGFAVNRAFFPYGQGSKLLVSLGIDVFRIDRVISSFGMPMGPFQLQDVA
GYGVGLAAKHIFAAAFGERNFSCDLMDLMVQDGRQGKSNGKGYYIYEKGRKPKPDPSVQH
VIEEYRNRAKTMPGGKPVILTDLDILEMIFFPVVNEACRVMDENVVIQASDLDIASVLGM
GFPKYRGGLIFWADTVGAPYIHSRLIQWAEIYGAFFKPSSYLGQRAKSGIPLSASSSSLL
DSTRSRM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcggccgacgatgcgggtgaccatggaggtgggcgccgacggcgtggcgctc
atcaccatctgcaacccgcccgtcaacgccctgcaccccgcgatctttgacgggctcagc
gagaagtacggcgaggccatggcccgcgacgacgtcaaggccatcgtgctcaccggcgat
gcaggaaaattctgcggaggtttcgacatcaatacgttcgcacggattcatcagactgga
aacatgtcactgctgccggactctgttaagcttgcgtcacatatgatggaagagggcaga
aaaccttcagttgcagccatccaaggccttgctctgggcggtggactagagttgactatg
gcttgtcatgctcggatatctacccctgaagctcaacttgggctaccagaactaactctt
ggagtaattcctggatctgggggaacccagcgtcttccgaggcttgtaggtcttcccaaa
gcaatagaaatgatgctgcaatcaaagttcattacagcaaaggaagggaaggaacgtggt
cttattgatgccctttgctcgggtgatgaattgataaagatgtcacgccattgggctctg
gagattgctagttgtcgtagaacttggacaaaatctctcggcagaacagataagcttggt
tcaccgtctgaagctcgtgctctattaagtacgacaagacagcaagtgaagaaaatttca
acaaacatgccgcagtatcaagcctgccttgatgttattgaagaaggtgtattatttgga
ggccatgcaggtgtcctaaaggaatataaggttttcaaggagttggtgccatcacaaaca
tcaaggtcacttgtccatgtctttttggcccagcgttctactacaaaggtgccaggtgtt
actaatgttcaactgaaacctaggaaaactagaaaagttgccattattggtggtggcctg
atgggctctggaattgcaacatcacttctcattagcaacatatctgttgttctcaaggaa
gtaaacccccagtttctgcaaaggggacaaaagatgatagcagctaatcttgagggcctg
gtcaaaaggggctcactcacaaaggacaagataaacaaggccatgtcacttctcaaaggt
gcactggattattcagaattcaaggatgttgatatggttattgaggctgtaatagagaac
attcctttgaagcaatcgatattttctgacattgagaagatctgcccaccacattgcata
tttgcaacaaacacatctaccatcgatttgaatgttgtcggcgagaagacaaattctcaa
gatagaattataggggcacattttttcagtcctgctcacattatgcctttacttgaaatt
gtccggacggagaagacatcaccacaagctatccttgacctcatcacacttggaaagata
ataaagaaagtccctgttgtggttggtaattgcacaggattcgcagttaaccgtgcattt
tttccttatggacagggttcaaagcttttagttagtcttggtattgatgttttccgaatt
gatcgagtaataagcagctttggaatgccaatgggaccatttcaactccaagatgtggct
ggatatggagtgggcttggcagcaaaacacatatttgctgctgcctttggagaacgaaat
ttcagctgtgatttaatggatttgatggtacaggatgggcggcaaggaaagagcaatggc
aaaggttattacatttatgagaagggcaggaagccaaagcctgaccctagtgttcaacat
gtgattgaggagtaccgaaatcgtgcaaagacaatgcctggtggaaagccggtgatttta
acggatctggacatactggagatgattttcttcccagttgtgaatgaagcatgcagggtt
atggatgaaaatgttgtgattcaggcttctgatcttgatattgcgtctgttcttgggatg
ggctttcccaagtacaggggtggtcttatcttctgggctgatactgtgggagcaccttat
atacattcaaggctaatccagtgggctgaaatctatggtgccttcttcaaaccatcatca
tatttgggacagagagctaaaagcggcatacccctgagcgcatcgagctcatccctgcta
gattctacgagatctcgcatgtaa
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