Setaria viridis (green foxtail): 117857020
Help
Entry
117857020 CDS
T07951
Name
(RefSeq) glutamine--tRNA ligase-like
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117857020
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117857020
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117857020
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
117857020
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class I (A)
117857020
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117857020
Prokaryotic type
Other AARSs
117857020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C2
tRNA-synt_1c_C
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
117857020
NCBI-ProteinID:
XP_034595381
LinkDB
All DBs
Position
5:complement(10711842..10718124)
Genome browser
AA seq
796 aa
AA seq
DB search
MGTGGDGEKAAPALPLEALLALGLDQRTAENALVNSKVTANLAAVIAEAGIKECDKSVGN
LLYAVATKYPTNALVHRPVLIKYVLSIKIKNPAQLDAALSFLTNTGPDSLDVEKFEEACG
VGVVVSIEEIKSTVTDVLEENMEAIKEQRYHMNVGTLCGQVRKRHPWGDAKAIKEEIDKR
LAEILGPKTEADNIKPVKKKKEKPAKVEEKKVAVATSAPPSEEELNPYTIFPQPEENFKV
HTEIFFSNGNIWRAHNTKEILEKHLKATGGKVMTRFPPEPNGYLHIGHAKAMFIDFGLAK
ERNGHCYLRFDDTNPEAEKKEYIDHIQEIVHWMGWEPYKVTYTSDYFQALYEHAVELIRR
GLAYVDHQTAEEIKEYREKKMNSPWRDRPIEESLKLFEDMRRGLIAEGAATLRMKQDMQN
DNKNMSDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCMVDSLENITHSLCTLEFDIRRPSY
YWLLVALDLYQPYVWEYSRLNISNTVMSKRKLNRLVTEKWVDGWDDPRLLTLAGLRRRGV
SSTAINSFIRGIGITRSDNSLIRVDRLEYHIREELNKTAPRTMVVLRPLKVVITNLEEGK
VMDLDGKMWPDASDTDASSHYKVPFSRTVYIESTDFRLKDSKDYYGLAPGKSVMLRYAFP
IKCTDVIYGNSPDDIVEIRAEYDPLKTSKLKGVLHWVAEPAPGIEPLKVEVRLFEKLFMS
ENPAELEDWLGDLNPHSKEVIKDAYAVPSLATAVLGDKFQFERLGYFAVDTDSTPEKLVF
NRTVTLRDSFGKAGPK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgggggagacggggagaaggcggccccggcgctgccgctggaggcgctgctg
gcgctcgggctcgaccagcgcaccgcggagaacgcgctcgtcaacagcaaggtcaccgcc
aacctcgccgccgtcatagccgaggctggcataaaggaatgtgacaagtcagttggcaat
cttctctatgcagtcgccactaagtacccaactaatgcacttgttcatcgtcctgtcctt
attaaatatgtcttgtcaataaagataaagaaccctgcacagctagatgctgctttgtca
tttcttaccaatacaggtcctgattctctggatgtcgagaagtttgaggaagcatgtggt
gtaggtgtggttgtttctattgaggagattaaatcaactgttactgatgttcttgaggag
aatatggaagctataaaggagcagcggtatcacatgaatgttggtaccctatgcggacag
gttaggaagagacacccatggggtgatgctaaggcgataaaggaggaaattgacaagagg
cttgcagaaatactaggtccgaagacagaagctgacaatataaaaccagtgaaaaagaag
aaggaaaaaccggcaaaagttgaggagaaaaaagttgcagttgccacttctgccccacca
tctgaggaggaattaaacccgtatactatatttcctcagccagaggaaaactttaaggtt
cacacagaaatattctttagcaatgggaacatatggagagcacataacacaaaggaaatt
ttagaaaaacatctgaaggcaactggaggaaaagtgatgacccgttttccaccagaaccc
aatggatatcttcatattggtcatgccaaggctatgtttattgattttgggctggctaag
gagcgaaatggtcattgctaccttaggtttgatgacacaaatccagaagctgaaaagaaa
gaatacatagatcacattcaggaaatcgtccattggatgggatgggagccctacaaagta
acatacacaagtgactatttccaagctttgtacgagcatgcagttgagttaatacggaga
gggctagcctatgtagatcaccagaccgcagaagaaatcaaggagtacagggaaaagaag
atgaatagtccatggagggatagaccaattgaagagtcgctgaaattatttgaagacatg
aggcgtgggttgattgctgagggcgcggcaactctccgaatgaagcaggacatgcagaat
gacaacaaaaacatgtctgacttaatagcatatagaataaaattcacccctcatccacat
gctggcgacaagtggtgtatctatccaagctatgactatgctcattgcatggttgattct
cttgaaaacatcacacattcgttgtgcacacttgaatttgatatacgtcgcccttcatac
tactggctgcttgttgccttggacctctatcagccatatgtgtgggaatattcgaggcta
aacatatcaaatactgtgatgtctaaaagaaagttgaatcgacttgtgacagagaagtgg
gtagatgggtgggatgatccccgcttgttgacattggcaggactccggcgacggggagta
tcatcaaccgcgattaattcgtttatccgtggaattgggataactagaagtgacaatagc
ttaattcgtgttgaccgtctggaatatcacatcagggaagagcttaataaaacagctcct
cgaacgatggttgttttgcgccctctaaaggttgtaataactaacttggaagaaggaaaa
gtaatggatcttgatgggaaaatgtggcctgatgcttctgatactgatgcttcctcccac
tacaaggttcctttctcaagaactgtctacattgagagtactgattttcgcctaaaggac
tcaaaagattactatgggctagcccctggtaaatctgtcatgctaaggtatgcattcccc
ataaaatgcacagatgttatctacggtaatagccctgatgatatcgttgaaattcgagct
gaatatgatcctttgaagacttctaaacttaagggtgttctgcactgggttgctgagcca
gcacctggtattgaaccattaaaggtggaagttagattgttcgagaaattgttcatgtca
gagaatcctgctgaattggaggactggctgggggatcttaacccacactcaaaagaggtg
ataaaggacgcctatgctgtaccgtcacttgccactgcggttctgggtgacaagttccag
tttgagcgcctcggctactttgcggtagataccgactccacgcctgagaagctggtgttc
aacagaacagttaccctccgcgattcatttggcaaagctggacccaagtga
DBGET
integrated database retrieval system
