Setaria viridis (green foxtail): 117860127
Help
Entry
117860127 CDS
T07951
Name
(RefSeq) probable gamma-aminobutyrate transaminase 3, mitochondrial
KO
K16871
4-aminobutyrate---pyruvate transaminase [EC:
2.6.1.96
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00250
Alanine, aspartate and glutamate metabolism
svs00650
Butanoate metabolism
svs01100
Metabolic pathways
Module
svs_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117860127
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
117860127
Enzymes [BR:
svs01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.96 4-aminobutyrate---pyruvate transaminase
117860127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
117860127
NCBI-ProteinID:
XP_034599249
LinkDB
All DBs
Position
6:complement(2072319..2077612)
Genome browser
AA seq
509 aa
AA seq
DB search
MIARGLFRSNAAASQFSRLVKYVASAGSLQGTHNFAEIPARYYSSEPSLKETEENGFKGH
SMLAPFTAGWQSTDLHPLVIERSEGSYVYDINEKKYIDALAGLWCTALGGNEPRLIKAAT
EQLNKLPFYHSFWNRTTKPSLDLANEILSMFTAREMGKVFFTNSGSEANDSQVKLVWYYN
NALGRPNKKKFIARSKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRFRLSD
ETEEEFSTRLANNLENLILKEGPDTIAAFIAEPVMGAGGVILPPKTYFEKIQAVLKKYDI
LLIADEVITAFGRLGTMFGCDMYNIKPDLVSIAKALSSAYLPIGAILVSPEITDVIYSQS
NKLGSFAHGFTYSGHPVSCAVAIETLKIYKERNIVEHVNKIAPRFQEGIKAFSGSPIVGE
IRGQGLILGTEFVDNKSPNDPFPAEWGVGAIFGAECEKRGMLIRVAGDSIMLSPPLIMTP
GEVEEIISKFGHALKATEERISELKSKKI
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcccgcggcctcttcagatccaatgccgccgcctcgcagtttagcaggttggtg
aaatatgtagctagtgctggaagcttgcaaggaacacacaattttgcagagatacctgcc
agatactacagctctgaaccttcacttaaggaaacagaggaaaatgggtttaaggggcat
agcatgctggctccattcacagctggttggcagagcaccgatttgcacccgctggttata
gagagatctgagggttcttatgtttatgacatcaatgagaagaagtatatagatgctctt
gcaggactgtggtgtacagctttaggtggtaatgagcctcgattaatcaaagctgcaact
gagcagctaaacaaattacccttctaccattccttttggaaccgtacgaccaagccgtca
ttggatctcgcaaatgaaattctcagcatgttcactgcaagggaaatgggcaaagtattc
ttcacaaatagtggttcagaagcaaatgactctcaggttaaactagtgtggtattacaac
aatgcactagggaggccaaacaagaagaaatttattgctcggtcgaaatcataccatggt
tcaacattaatagcggctagtctatcaggtctgcctgcacttcatcagaagtttgatcta
ccagcaccttttgttctgcacacagactgccctcactattggcgcttccgtctttctgat
gagacagaagaagagttttcaactagacttgccaacaatttggagaatcttatcctcaaa
gaaggacctgacacaattgctgctttcattgcagaacctgtgatgggtgccggtggtgtt
atccttcctccaaagacctattttgagaagattcaagcagttctcaagaagtatgacatt
ttactaatcgcagatgaggtcattactgcattcggaagattagggaccatgtttggatgt
gatatgtacaacattaaaccagatcttgtttccattgccaaggctctctcttctgcctat
ttgccaattggagcaatccttgttagcccagaaataacggatgtaatttactcacagagc
aataagcttggttcttttgctcatggctttacatactcgggacatccagtttcttgtgct
gttgccatagaaacgttgaagatatataaagaaaggaacattgttgaacatgttaacaaa
attgctccaaggttccaggagggaatcaaggccttctcaggaagcccaattgttggggag
atacgtggtcagggactgatacttggaactgaatttgtcgacaacaaatcgccaaatgat
cctttcccagctgaatggggtgtgggtgcaatctttggcgccgagtgtgagaagcgtggg
atgctcatcagggtggctggagatagcatcatgctgtcaccccctctgataatgactcct
ggagaagttgaagaaatcataagcaaattcggccatgccctgaaggccactgaggaaagg
atctcagagctcaaatccaagaagatttag
DBGET
integrated database retrieval system
