KEGG   Setaria viridis (green foxtail): 117863203
Entry
117863203         CDS       T07951                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03020  RNA polymerase
svs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117863203
  09124 Replication and repair
   03420 Nucleotide excision repair
    117863203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svs03021]
    117863203
   03400 DNA repair and recombination proteins [BR:svs03400]
    117863203
Transcription machinery [BR:svs03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117863203
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117863203
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD
Other DBs
NCBI-GeneID: 117863203
NCBI-ProteinID: XP_034602711
LinkDB
Position
7:12756951..12759718
AA seq 114 aa
MSTMKFCRECNNILYPKEDRDKRTLFFACRNCEHQEVSDYNCVYRNEVHHTAGERTQVLQ
DVASDPTLPRTKTVRCALCGHGEAVFFQATARGEEGMTLFFVCCSPDCGHRWRE
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagcaccatgaagttttgccgtgagtgcaacaacatcctgtatcccaaggaagacagg
gacaagcgcaccctcttcttcgcatgtcgcaactgcgagcaccaggaggtctctgactat
aactgtgtctatcggaacgaggtgcaccacactgctggagagcgaacacaggtcttgcag
gatgtagcttctgacccaactcttcccagaaccaagaccgtccgatgtgctctctgtggg
catggagaggctgttttcttccaggctacggcaagaggggaggaggggatgaccctgttc
tttgtgtgctgcagccctgattgtggtcatcggtggagggaatga

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