Setaria viridis (green foxtail): 117865898
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Entry
117865898 CDS
T07951
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial-like
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00280
Valine, leucine and isoleucine degradation
svs00650
Butanoate metabolism
svs01100
Metabolic pathways
svs04146
Peroxisome
Module
svs_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117865898
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117865898
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117865898
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
117865898
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
117865898
NCBI-ProteinID:
XP_034606049
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Position
7:34307071..34309685
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AA seq
389 aa
AA seq
DB search
MSSLEEPLGLGDLPKLSINRLGSLSSPRAYRRAAAADDINNRKYNNSCNGSTQMVFHGNS
HAWHPQCRQADSSCDVVELRDLPRKVMWDLPSFVKIVEVGPRDGLQNEKGNVPTSVKIQL
IHKLVAAGLSVVEATSFVSPKWVPQLADAKEVLKGIQQVPGVRHPVLTPNLRGFEAAVAA
GAKEIAVFASASESFSKSNINCTIEESLVRYRDVTAAAKKYGLLIRGYVSCVIGCPVEGA
IDPSKVAYVAKELYNMGCSEISLGDTIGVGTPGSVAAMLEAVMSFVPVDKIAVHFHDTYG
QALANILVSLQMGISIVDSSVSGLGGCPYAKGATGNVATEDVVYMLHGLGIETNVDLNKL
MEAGDYISRHLGRPVGSKTAAALRKHLSP
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcctcgaggagccgcttggtctcggagacctgccaaagttgagtattaacaga
cttggaagcctctcatcgccaagagcttatcgtagggcagcagcagctgatgacatcaac
aatcgcaagtataacaactcctgcaatggaagcactcagatggtcttccatggcaattct
catgcatggcatccgcaatgccgtcaggccgattcatcatgtgatgtagtggagcttaga
gatcttcccagaaaggttatgtgggatctaccaagctttgtcaagatagttgaagttgga
ccacgagacggcctgcaaaacgaaaagggcaatgtaccaacatctgtcaagatccaactg
atacacaaattagtggctgcaggtttatcagtagttgaagccacaagttttgtatcccca
aaatgggtgccgcagttagctgatgcaaaggaagtcctcaaagggatccagcaggtgcca
ggtgtgaggcatccagtgttaactcctaacctcagaggatttgaggctgctgttgcagct
ggtgcaaaggaaattgcggtatttgcatctgcctctgaatccttctctaagtcgaacatt
aactgtaccattgaggaaagtcttgttcggtaccgtgatgttactgctgctgccaagaaa
tatggactccttatccgcgggtatgtttcctgtgtaattggttgccctgttgaaggtgca
atcgatccatcgaaggtggcatatgtagctaaggagctttataacatggggtgctcggag
atttcacttggcgacacaattggtgttggtacaccaggtagtgtagctgctatgcttgaa
gctgtcatgtcctttgttccggtggacaagattgctgttcatttccacgatacgtacggc
caggcccttgccaatatcctagtctcccttcaaatggggatcagcatagtggactcgtca
gtttcaggcctcggaggctgcccgtatgcaaagggcgcaactggcaatgtcgccactgag
gacgtcgtgtacatgctccatggcctggggatagagaccaacgtcgacctcaacaagctc
atggaggctggcgattacatctccaggcatctaggaaggccggtgggctccaagactgct
gccgctctgcgcaagcacctgagtccctaa
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