Streptomyces violaceoruber: B1H20_06690
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Entry
B1H20_06690 CDS
T05124
Name
(GenBank) pseudouridine-5-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
svu
Streptomyces violaceoruber
Pathway
svu00240
Pyrimidine metabolism
svu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
B1H20_06690
Enzymes [BR:
svu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
B1H20_06690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
ARF61128
UniProt:
A0A1V0U801
LinkDB
All DBs
Position
1504958..1505893
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AA seq
311 aa
AA seq
DB search
MSQNSPDPYEPVLSAEVRAALGAGRPVVALESTIIAHGLPRPRNLSVALELEGLVRSAGA
APATVAVLDGRAHVGLGAEQLERVAADPSVRKLGHRDLAPALATGASGATTVSATAFLAA
RAGVGVFATGGLGGVHREWAVDQDESADLRLLARTGITVVCAGVKSILDVPATLQRLETL
GVGVLGYGTGLFPGFYLSSSGEPVDWTVHSPEEVVEVIRAKAALGGPPTALIVANPVPED
EQLDPRLHDRVLAEALDACRERAVAGQAVTPFLLDQLMRRTDGASLEANLAAVRGNVALA
SRIAVAAVEPR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaactcgcccgacccctatgagccggtgctctcggcggaggtgcgcgccgct
ctgggcgcgggacggcccgtcgtggcgctggagtcgacgatcatcgcgcacggtctgccg
cgcccccgcaatctctccgtggccctggaactggaggggctcgtccggtccgccggggcc
gcccccgccaccgtggccgtgctcgacgggcgggcccatgtcggtctgggcgcggagcag
ttggagcgggtcgccgccgatccctcggtacgcaagctggggcaccgcgatctcgccccg
gcgctggccaccggggcgagcggtgcgacgacggtgtccgcgacggcgttcctggcggca
cgggcgggggtcggcgtcttcgcgacgggcgggctgggcggcgtccaccgggaatgggcc
gtggaccaggacgagtcggccgatctgcggctgctcgcccgcaccggcatcaccgtggtc
tgcgcgggggtgaagtcgatcctcgacgtcccggcgaccctccagcgcctggagaccctc
ggcgtcggcgtcctcgggtacggcaccgggctcttccccggcttctatctgagcagctcc
ggcgagcccgtcgactggacggtgcacagccccgaggaggtggtggaggtgatccgggcg
aaggcggcgctgggcgggccgcccaccgcgctgatcgtcgccaaccccgtaccggaggac
gagcagttggatccccggctgcacgaccgggtgctggcggaggcgctggacgcgtgccgg
gagcgggccgtcgcggggcaggccgtgacgccgttcctgctcgaccagttgatgcggcgg
accgatggcgcgtccctggaggcgaacctcgcggcggttcgcgggaacgtggcgctcgcc
tcacggatcgcggtcgcggccgtggaaccccggtga
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