Shewanella woodyi: Swoo_3121
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Entry
Swoo_3121 CDS
T00676
Name
(GenBank) glutaminyl-tRNA synthetase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
swd
Shewanella woodyi
Pathway
swd00970
Aminoacyl-tRNA biosynthesis
swd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Swoo_3121
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
swd01007
]
Swoo_3121
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swd03016
]
Swoo_3121
Enzymes [BR:
swd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
Swoo_3121
Amino acid related enzymes [BR:
swd01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Swoo_3121
Transfer RNA biogenesis [BR:
swd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Swoo_3121
Prokaryotic type
Other AARSs
Swoo_3121
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
ACA87392
UniProt:
B1KLU5
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All DBs
Position
complement(3822853..3824523)
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AA seq
556 aa
AA seq
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MSHLDSEVRPSNFIRNIIDEDLESGKHESVHTRFPPEPNGFLHIGHAKSICLNFGIAKDY
KGQCNLRFDDTNPEKEDIDYVHSIQDDVKWLGFDWDGDIRYSSNYFDQLHKYAIELIEKG
LAYVCFLNGEETREYRGTLKAPGKNSPYRDTSVAENLELFEKMRKGEFKEGECSLRAKID
MASSFMCMRDPIIYRVRFAHHHQTGDKWCIYPMYDFTHCISDAIENISHSLCTLEFQDNR
RLYDWVLDHLDDFQAPNRTRQYEFSRLNLEYTLMSKRKLNDLVTRKLVNGWDDPRMPTIA
ALRRRGYTPSAIREFCLRIGVTKQDNMVEVGMLDACIREELNDKAPRAMAVINPVKVIIE
NYPEGQIETLSAPIHPTNEEMGKRELAFGRELYIDADDFREEANKKYKRLVQGKEVRLRN
AYVIKAERCDKDADGNVTTIYCSYDDETLGKNPSDGRKVKGVIHWVEATSAKPAEFRLYD
RLFTDANPAAAETVDEVLNPDSLVVAHGFVEAGLVAAEAEKAYQFEREGYFCADNKDSTP
ENLVFNLTVALRDSSQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatctggacagcgaagttcgtcctagtaacttcattcgtaatatcatagatgaa
gatcttgaaagcggtaagcatgagagtgtgcatacccgttttccacctgagcctaatggc
tttcttcatatcggccatgcaaaatctatctgcttaaacttcggtatagcaaaggattac
aagggccaatgtaacttacgtttcgatgacacgaatcctgagaaagaagatatcgattat
gttcattctattcaggatgatgtgaagtggcttggttttgactgggatggcgatattcgc
tactcatcaaactattttgaccagttacataagtatgcgattgagttgatcgagaaaggc
ttagcctatgtctgtttccttaatggggaagagactcgcgagtatcgcggcacacttaaa
gcgcctggaaagaacagtccttatcgtgacacatcagtagctgagaacctcgagctattt
gaaaagatgcgtaaaggtgagttcaaagagggagagtgttctcttcgagctaaaatcgac
atggcatcatcatttatgtgcatgcgtgatccgataatctatcgtgtccgttttgctcat
caccatcaaactggtgataagtggtgtatctatcctatgtacgattttactcactgtatc
tcagatgcgattgagaacatcagtcactcactttgtacattagagtttcaggataatcgc
cgtttgtatgattgggtattggatcacttagatgatttccaagcgccaaatcgtactcgt
cagtatgagttttctcgtctaaacctagagtacaccttgatgtctaagcgtaagcttaac
gatcttgtgactcgtaaattggttaatggctgggatgacccacgtatgccgaccattgca
gcgcttcgtcgccgtggttatacgccgtcggctatccgtgagttctgtttacgcattggc
gtaactaagcaggacaacatggtagaagttggaatgttagatgcgtgtatccgtgaggag
cttaatgacaaagcgcctcgtgcaatggctgtgatcaaccctgttaaggtgataatcgag
aactacccagaaggtcaaattgaaaccttgagcgcaccaatacacccaactaatgaagag
atgggcaagcgtgaattggcttttggtcgtgaactttatatcgatgctgatgacttccgt
gaagaagcgaataagaagtacaagcgtctggttcaaggcaaagaggtgcgtttacgtaac
gcttatgtcattaaagcagagcgttgtgataaagatgccgatggcaatgtcactactatc
tactgtagctatgatgatgagacgctaggtaagaatccatcagatgggcgtaaagtaaaa
ggggttatccattgggttgaagcaacatctgctaaacctgcagagttccgcctttacgat
cgtctgtttaccgatgctaacccagcggctgctgagactgtcgatgaggtacttaaccca
gactctctggttgtagctcatggtttcgttgaagcaggtcttgtggctgcagaagctgaa
aaagcatatcagtttgagcgtgaaggctacttctgtgcagacaataaagattcaacacca
gaaaacttggtattcaatctaaccgttgcattacgagactcttctcagtaa
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