Shewanella woodyi: Swoo_3473
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Entry
Swoo_3473 CDS
T00676
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
swd
Shewanella woodyi
Pathway
swd00730
Thiamine metabolism
swd01100
Metabolic pathways
swd01240
Biosynthesis of cofactors
swd04122
Sulfur relay system
Module
swd_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Swoo_3473
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Swoo_3473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swd03016
]
Swoo_3473
Enzymes [BR:
swd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
Swoo_3473
Transfer RNA biogenesis [BR:
swd03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Swoo_3473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
ACA87739
UniProt:
B1KQY3
LinkDB
All DBs
Position
complement(4247702..4249156)
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AA seq
484 aa
AA seq
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MKFIVKLFPEIMMKSKPVRMRFTKMLETNIRNVLKKVDETAKVKREWDKIMVLVPDDRQD
LVEAFAERLACIPGIAHVLQVSESTFESVDDIYQQTLAVYKDELAGKTFCVRVKRVGNHD
FRSIEVERYVGGGLNQFTEAAGVRLKNPDMTINLEIDKESLYLVSKRIEGLGGYPMATQE
DVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEIGVKQVAYHLWQKYGESHKVK
FISIPFDPVVTEILEKIDNGQMGVILKRMMMRAAAKVARKMGIQALVTGEAMGQVSSQTL
TNLSIIDRCTDQLILRPLIAMDKQDIINLSRKIGTEDLSKSIPEYCGVISQRPTVKAVLS
KIEAEELKFSEDLIDRVIEAAEVIDIREIATSMDTKITSTETVGDINSGEVIIDVRAPEE
EEQSPLEVEGVEVKAIPFFRLATKFADLDKSKTYLLYCDRGVMSKLQALYLQEQGYDNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcgtaaaactgttccctgaaatcatgatgaaaagcaaaccggtaagaatg
cgatttaccaagatgcttgaaaccaatattcgtaatgtacttaagaaggtcgatgagacc
gctaaagtgaagcgtgagtgggacaaaatcatggtgttggtgccagacgatagacaagac
ttagtggaggctttcgctgagcgtcttgcttgtattcctggtatcgctcatgtgcttcag
gtaagcgagagcacattcgaatcggttgatgatatctatcaacaaactttagcggtttat
aaagatgaacttgcgggtaaaaccttttgtgtgcgggttaagcgtgtcggtaatcatgat
tttagatccatcgaagttgagcgttatgtcggtggtgggctaaatcagtttactgaggcg
gcaggtgttagattaaaaaatcctgatatgacgattaatcttgagatagataaagagagt
ctatacctagtaagtaaacgcattgagggcttaggtggttaccctatggcgactcaggaa
gatgtattgtcgcttatctctggcggatttgattcaggtgtttccagttatcagtttatt
aaacgtggctctcgtacccactactgcttcttcaacttaggtggcgatcagcatgagata
ggtgtgaagcaggtggcttatcatctatggcagaaatatggtgagtcccataaggtcaag
tttatctcaatcccctttgatcctgtggtaacagagatccttgagaagatagataatggc
cagatgggggttattctcaagcgtatgatgatgcgagctgcggctaaagttgccagaaag
atgggaatacaagcgttagtaactggtgaggcgatggggcaagtatcaagccaaaccttg
actaacctaagcatcatcgaccgatgcacagatcagcttattctacgtccactcatcgcc
atggataagcaggacattattaacttaagtcgtaaaattggtacagaagatctctctaag
tctatccccgagtattgcggtgtgatctctcagcgcccaacggttaaggctgtactctct
aagattgaagctgaggagctgaagttttctgaagaccttattgaccgtgttattgaagct
gctgaggttatcgatatcagagagatagctactagtatggacactaagatcacctcaacg
gaaaccgttggcgatattaactcaggtgaagtgatcatcgacgttcgtgctccagaagag
gaggagcagtcaccgcttgaggttgagggcgttgaagtgaaggcgatccctttctttaga
ttagcgactaagtttgccgatttggataagagtaaaacttatctgctttactgcgacaga
ggcgtgatgagtaagcttcaggcgctataccttcaagaacaaggctatgataacgttaaa
gtttaccgcccttaa
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