Shewanella woodyi: Swoo_4444
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Entry
Swoo_4444 CDS
T00676
Name
(GenBank) UbiD family decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
swd
Shewanella woodyi
Pathway
swd00130
Ubiquinone and other terpenoid-quinone biosynthesis
swd01100
Metabolic pathways
swd01110
Biosynthesis of secondary metabolites
swd01240
Biosynthesis of cofactors
Module
swd_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
Swoo_4444
Enzymes [BR:
swd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
Swoo_4444
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ACA88696
UniProt:
B1KK65
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All DBs
Position
5380167..5381648
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AA seq
493 aa
AA seq
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MSFKDLRSFIDHLESQGELKRISHPVDPNLEMTEIADRVLRAKGPALLFENPVGNDMPVL
ANLFGTPKRVAMALGKEDPLALREVGELLAFLKEPEPPRGFKDAIAKIPMFKQALNMPPK
TVRNPPCQQVVKTGEEVDLTKLPIQHCWPGDVAPLVTWGLTITKGPRQKRQNLGIYRQQL
LGRDKLIMRWLDHRGGALDFKDFKEKHPGERYPVVVALGSDPVTILGAVTPVPDSMSEYA
FAGLLRGERTDVCKAISCDLEVPATSEIILEGYIDPDEMAEEGPYGDHTGYYNETDSFPV
FTVTHITHRKDAIYHSTYTGRPPDEPAMLGVALNEVFVPILRKQYPEIIDFYLPPEGCSY
RMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVVVDEDVNCRDWNDVIWAITTRMDP
KRDTVMIENTPIDYLDFASPVAGLGSKMGMDATNKWEGETDREWGTPIVMDQAVKDKVDQ
IWADLGIDDAPTL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaggatttacgcagttttatagaccacctagaaagccaaggtgaactaaag
cgtattagccatccggtcgatcctaatcttgaaatgacagagatcgccgatcgcgtgtta
cgcgctaaagggccagccctgttatttgaaaaccctgtaggcaatgatatgcctgtttta
gctaacctttttggtacgccaaaacgcgttgctatggcattgggtaaagaggaccccctc
gcactaagagaggtcggtgagctattggcttttctgaaagaacctgagccacctagaggg
tttaaagacgcgatcgctaagatccccatgtttaagcaagccctaaacatgccacctaag
acagtccgcaatccgccctgccagcaagtagtcaaaacgggagaggaggtcgatctcact
aaactccccattcagcactgctggcctggtgatgtcgccccgctagtgacttggggatta
accatcactaagggacctcgccaaaagcgccaaaacttagggatctaccgtcagcagctt
ctcgggagagacaaactgataatgcgctggctcgatcaccgtggtggtgcattagatttt
aaagattttaaagagaaacacccaggtgaacgctacccagtcgtcgttgccttaggttca
gatcctgtgaccattttaggcgcggtaactccagtaccagactccatgagcgagtatgct
tttgcaggccttctgcgcggtgagcgcaccgatgtctgcaaggcgataagctgcgattta
gaggtaccggccactagtgagatcattctcgaaggttatattgaccctgatgagatggca
gaagagggtccctatggtgatcacacgggttactataatgagactgactcattccctgtc
tttaccgtgacccatattacccacagaaaagatgccatctaccacagtacctacacaggc
cgtccacctgatgagccggctatgctaggtgtcgcacttaatgaagtgttcgtgcctatc
ttacgtaagcagtatccagaaattatcgacttttatctgccacctgaaggttgctcctac
agaatggccgtgatctccatacgtaaacagtacccgggtcatgctaaacgggtcatgatg
ggtgcttggtcattcctgcgtcagtttatgtacactaaatttatcgtcgtagtagatgag
gatgtgaactgccgagattggaacgatgtcatctgggccatcaccacgcgcatggatcct
aaacgtgatactgtaatgatagagaacacacctatcgattacctcgatttcgcctctccg
gttgcaggactcggctctaagatgggcatggatgcaaccaataagtgggaaggtgaaacc
gatcgcgaatggggaacacctatcgtcatggatcaagcggtaaaagataaagttgaccag
atctgggccgacttgggcatagatgacgcccctaccctataa
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