KEGG   Rhizorhabdus wittichii RW1: Swit_0628
Entry
Swit_0628         CDS       T00538                                 
Name
(GenBank) type II secretion system protein E
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
swi  Rhizorhabdus wittichii RW1
Pathway
swi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:swi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Swit_0628
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:swi02044]
    Swit_0628
   02035 Bacterial motility proteins [BR:swi02035]
    Swit_0628
Enzymes [BR:swi01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Swit_0628
Secretion system [BR:swi02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   Swit_0628
Bacterial motility proteins [BR:swi02035]
 Pilus system
  Pilus assembly proteins
   Swit_0628
SSDB
Motif
Pfam: T2SSE Mg_chelatase AAA_30 Zeta_toxin AAA_28 ABC_tran AAA_29 KAP_NTPase Pox_A32 AAA_23 FtsK_SpoIIIE DEAD nSTAND3 AAA_16 AAA_18 CbiA TrwB_AAD_bind cobW Sigma54_activ_2 AAA_19 AAA_22 Viral_helicase1 AAA_2 ATP_bind_1 dNK
Other DBs
NCBI-ProteinID: ABQ66996
UniProt: A0A9J9LDH8
LinkDB
Position
681560..683125
AA seq 521 aa
MSAFGKRGAMTHGAKPAFGVARPMHVDSAPGPLTGGLQFPSIDSAAFPGAGTDPFAGLPS
FDDPIAVSEEDVALPKHADAMARLAIREASSGDAGRARVEGFEASIHKIKEQVLPRLLER
VDPEAAASLSKDELAEEFRPIIGEVLAELRITLNRREQFALEKVLIDELLGLGPLEELLS
DPLITDIMVNGPEQTYVERKGKLELAKVTFRDEEHLFQIAQRIVSKVGRRVDQTTPLADA
RLTDGSRVNVIVPPLSLRGTAISIRKFSSKPITLDMMARSGSMSEQMATMLKIAGASRFN
IVISGGTGSGKTTMLNALSKMIDPGERVVTIEDAAELRLQQPHWLPLETRPANLEGQGAI
TIRDLVVNALRMRPDRIILGEIRGPECFDMLAAMNTGHDGSMCTLHSNSPREALARMENM
VMMSDIKVPKEAISKQIADSVDLIVQVKRLRDGSRRVTSITEVLGMEGPVIITQELFKFE
YHAEDSEGRIIGEFATSGLRPYTIEKARQFGFDQPLLEACL
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgagtgctttcggcaagcgtggagcgatgacgcacggggccaagcccgccttcggcgtg
gcgcgcccgatgcacgtcgacagcgcgcccggaccgctgaccggcgggctgcaattcccg
tcgatcgacagcgccgccttccccggcgcgggcaccgatcccttcgccggcctgccgagc
ttcgacgatccgatcgcggtgagcgaggaggacgtcgccctccccaagcatgccgacgcg
atggcgcggctcgcgatccgcgaggcctcgtcgggcgatgccggccgcgcgcgggtcgag
gggttcgaggcgtcgatccacaagatcaaggaacaggtgcttccccgcctgctcgaacgg
gtcgaccccgaagccgccgcctcgctgagcaaggacgagttggccgaggagttccgcccg
atcatcggcgaggtgctcgccgagctgcgcatcaccctcaaccgccgcgagcagttcgcg
ctcgaaaaggtgctgatcgacgagctgctcggcctggggccgctcgaggagctgctgagc
gacccgttgatcaccgacatcatggtcaacggccccgagcagacctatgtcgagcgcaag
ggcaagctcgagctcgccaaggtcaccttccgcgacgaggagcatctgttccagatcgcc
cagcgcatcgtctccaaggtcggccgccgggtcgaccagaccacgccgctggccgacgcg
cgcctgaccgacggcagccgcgtcaacgtcatcgtcccgccgctgtcgctgcgcggcacg
gcgatctcgatccgcaaattctcgtccaagccgatcacgctcgacatgatggcgcgcagc
ggatcgatgagcgagcagatggcgacgatgctcaagatcgccggggcgagccgcttcaac
atcgtcatctcgggcggcaccggatcgggcaagacgacgatgctcaacgcgctgtcgaag
atgatcgacccgggcgagcgcgtcgtcaccatcgaggacgcggccgagctccggctgcag
cagccgcactggctgccgctcgagacgcggcccgccaatctggaaggccagggcgcgatc
acgatccgcgacctcgtcgtcaacgcgctgcgcatgcggcccgaccgcatcatcctgggc
gagattcgcgggccggaatgtttcgacatgctggccgcgatgaacaccggtcatgacgga
tcgatgtgcaccctccactccaacagcccgcgcgaggcgctggcgcgcatggagaacatg
gtgatgatgtcggacatcaaggtgcccaaggaggcgatctcgaagcagatcgccgactcg
gtcgacctgatcgtccaagtcaagcgcctgcgcgacggatcgcgccgcgtcaccagcatc
accgaggtgctgggcatggaaggtccggtgatcatcacccaggaactgttcaagttcgaa
tatcatgccgaggattcggaaggccggatcatcggcgaattcgcgacctcgggcctgcga
ccctacacgatcgagaaagcgcgccagttcggcttcgatcagccgctgctcgaagcctgc
ctctga

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