Rhizorhabdus wittichii RW1: Swit_1071
Help
Entry
Swit_1071 CDS
T00538
Name
(GenBank) fumarate lyase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00362
Benzoate degradation
swi01100
Metabolic pathways
swi01120
Microbial metabolism in diverse environments
swi01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Swit_1071
Enzymes [BR:
swi01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
Swit_1071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
DUF883_C
Motif
Other DBs
NCBI-ProteinID:
ABQ67437
UniProt:
A0A9J9H9Q2
LinkDB
All DBs
Position
complement(1196680..1197825)
Genome browser
AA seq
381 aa
AA seq
DB search
MSDLLRVRPAATPAMLAIFSDAAVIRHALRFEAALACAQAAEGLIGKGIADAIADLCGGA
GIDPADLAERATLAGTLAIPLLALLRAELPPPAAEALHRGATSQDLADTVLMMQVVQATA
LLAVDLDRVRMALHALAELHAATPAIGRTLLQDAVPIGFGLRLAQAAAGVGDAGRRLEGE
VAVHARVQLGGPAGSRAGLGGKGAAIAARMAGELGLVAGVPWHANRTGVAAIAAAVGIVI
GALAKLARDISLLAQNAIGEVREPAIPGRGGSSSMGHKRNPTGCQVALSAAIRAPGLVAA
VLAALPAEEERGLGGWQAEGPALADLFLLAAGSAAAMADVAEGLEIDEAAIARNLAAASV
VDGIGESAAIVSAILAQYRKG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctgttgcgcgttcgtcccgccgccactccggcgatgctggccattttctcc
gacgcggcagtgattcgtcatgcgctgcggttcgaggcggcgctggcctgcgcccaggcc
gccgagggcctgatcgggaaaggcatcgccgatgccatcgccgatctgtgcggcggtgcc
gggatcgatcccgccgacctggcggagcgggcgacgctggccgggacgctcgcgattccg
cttctggccctgttgcgggccgaattgccgccgcccgccgccgaggcgctccatcgcggc
gccacgagccaggatctggcggatacggtgctgatgatgcaggtcgtgcaggcgaccgcg
ctgctggcggtcgatctcgatcgcgtccgcatggcgctccacgccctggccgaactccat
gctgcgacgccggcgatagggcgcacccttctgcaggatgccgtgccgatcggcttcggc
ctccggctcgcccaggcggcggcgggggtcggcgatgccgggcggcgattggaaggcgag
gtcgcggtccacgcgagggtccagctcggcggaccggcgggaagccgcgccggtcttggc
gggaagggggccgcgatcgccgcacggatggccggcgaactggggctggtcgcgggtgtg
ccgtggcatgcgaaccgcacgggcgtggcggcgattgccgcggcggtggggatcgtgatc
ggagcgctcgccaagctggcacgggatatctcgctgctggcccagaacgcgatcggcgaa
gtccgggagcccgccattccggggcggggcggctcctcgtctatgggccataagcgcaat
ccgaccggatgccaggtcgcgctgtcggcggcgatccgcgcgcccggcctggtcgccgct
gtcctcgccgccttgccggccgaggaggagcgcggcctcggcggatggcaggcggagggg
ccggcgctggcggatttgttcctgctcgccgcaggaagcgcggcggccatggcggatgtc
gcggaagggctggagatcgacgaggcggcgatcgcccgcaacctggcggcggcatcggtg
gtggacggcatcggcgaaagcgcggcgatcgtttccgcgatcctcgcccagtatcgaaaa
ggctag
DBGET
integrated database retrieval system