Rhizorhabdus wittichii RW1: Swit_3566
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Entry
Swit_3566 CDS
T00538
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Swit_3566
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
swi01007
]
Swit_3566
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swi03016
]
Swit_3566
Enzymes [BR:
swi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Swit_3566
Amino acid related enzymes [BR:
swi01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Swit_3566
Transfer RNA biogenesis [BR:
swi03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Swit_3566
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
ABQ69912
UniProt:
A0A9J9HE98
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All DBs
Position
3928621..3930372
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AA seq
583 aa
AA seq
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MVEGGGAQRQLRRRTPPPPSAVPLPICDGEDLGWPHGHYGFFSVGLSLQGRHMTDSITPV
ALREAALVSKAWPYEEARKLLKRYEKGAPAKGHVLFETGYGPSGLPHIGTFNEVLRTTMV
RRAYEEMSDVPTRLIAFSDDMDGLRKVPDNVPNQEMLRAHLGKPLTKIPDPFGKYESFAH
HNNAMLREFLDRFGFDYDFRSSTEAYESGQFDEALKDILRHYDGIMGIMLPTLRKERQAT
YSPVLPISPKSGVVLQVPVEVVDADQGLIRFDDEGETVVQSILGGKAKLQWKVDWAMRWV
ALGVDYEMSGKDLIDSVVQSSKIARELGARPPEGFNYEMFLDEKGEKISKSKGNGLSLEQ
WLTYGPEESLAFYAYREPKKAKQLHMGVIPRAVDDYWQFRGNYPGQPIEQKLGNPVHHIH
GATGDAVPDNVLPVTFGLLLNLVGVMGDASKEQVWGYLANYVPDASAAKYPELDRLIGHA
LAYHRDFVAPTLKRRKPTDNEAAALRALDAKLAAMPADASAEDIQNEVYAIGKEEAHGFA
SLRDWFKALYETLLGAEQGPRMGSFIALYGIANSRRLIAEALA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggggggtggcgcgcagcgccagcttcgccggcgcacccctccaccgccttcg
gcggtccccctccccatctgcgatggggaggatcttggatggcctcatgggcattacggt
tttttttcggtcggtctgtcgctacaggggcgccatatgaccgacagcatcacccccgtc
gccctgcgcgaagccgcgctcgtctccaaggcctggccctatgaggaggcgcgcaagctg
ctcaagcgctatgagaagggcgcgccggccaaggggcatgtgctgttcgagaccggctac
ggcccgtcgggcctgccgcatatcggcaccttcaacgaggtgctgcgcacgaccatggtg
cgccgcgcctatgaggagatgtcggacgtcccgacccgcctgatcgcgttcagcgacgac
atggacgggctgcgcaaggtgccggacaacgtgccaaaccaggagatgctgcgcgcccat
ctcggcaagccgctgacgaagatccccgatccgttcggcaaatatgagagcttcgcgcat
cacaacaacgcgatgctgcgcgaattcctcgaccgcttcggcttcgactatgacttccgc
tcctcgaccgaggcctatgagagcggccagttcgatgaagcgctgaaggatatcctgcgc
cattatgacggcatcatggggatcatgctgccgacgctgcgcaaggagcggcaggcgacc
tattcgccggtgctgccgatcagcccgaagagcggcgtcgtcctgcaggtgccggtcgag
gtggtcgacgccgaccagggcctgatccgcttcgacgatgagggcgagacggtcgtccag
tcgatcctcggcggcaaggccaagctccagtggaaggtcgactgggcgatgcgctgggtc
gcgctgggcgtcgactacgagatgtcgggcaaggatttgatcgactcggtcgtccagtcg
tcgaagatcgcgcgcgagctgggcgcccgcccgcccgagggcttcaactatgagatgttc
ctcgacgagaagggcgagaagatctccaagtcgaagggcaacggcctcagcctcgagcaa
tggctgacctacgggcccgaggagagcctggccttctacgcctatcgcgagccgaagaag
gcgaagcagctccacatgggcgtgatccccagggcggtcgacgactattggcagttccgc
ggcaattatcccggccagccgatcgagcagaagctcggcaatccggtccaccacatccac
ggcgcgaccggggacgcggtgcccgacaatgtgctgccggtcaccttcggcctgctgctc
aacctcgtcggggtgatgggcgacgcgtcgaaggagcaggtgtggggctatctggccaat
tacgtgcccgacgcctcggccgcgaaatatcccgagctcgaccggctgatcggccatgcg
ctcgcctatcatcgcgacttcgtcgcgccgacgctcaagcgccgcaagccgaccgataat
gaggcggcggcgctgcgcgcgctcgacgcgaagctggcggcgatgccggccgacgcctcg
gccgaggacatccagaacgaggtctatgcgatcggcaaggaggaggcccatggcttcgcc
tcgctgcgcgactggttcaaggcgctttacgagaccctgctcggcgccgagcagggcccg
cgcatgggcagcttcatcgccctctacgggatcgccaacagccgccgcctgatcgccgag
gcgctggcctga
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