Shewanella piezotolerans: swp_3122
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Entry
swp_3122 CDS
T00791
Name
(GenBank) Conserved hypothetical protein
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swp03016
]
swp_3122
Enzymes [BR:
swp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
swp_3122
Transfer RNA biogenesis [BR:
swp03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
swp_3122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Motif
Other DBs
NCBI-ProteinID:
ACJ29834
UniProt:
B8CPX1
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All DBs
Position
3273262..3275124
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AA seq
620 aa
AA seq
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MTVSDNIRSILATNNSEHISIAMFGLGSVSQILALKKLHSTKNGSLTLKIFCAVDDHIEQ
IFKVLSQTRPEIHLVSIEGCQRVKLNHGRFIIDFHLGDYGQQLRQLPLCNSLISHWLCSS
EFETQSMSQALFWQMAKHSQDNCHCLISAELPIESQQKLLALCDMVGFTSENSMVSSAQI
DNVLLMERHALRAQQSSQQAPYPIKIAESTTEIAVIGGGIATASLVLSLAERQKKIHVFC
EDSELAQAASGNKQGAIYPLLTPDNNSLSQYFQLAYLFSLHRLNALAATKYPIDFDLCGV
LHTGHDERSRKRVQKIINGHPWNTDIAHAVNEKQSSEIAGLEINEAGIFYPLGGWVAPQD
LTQASFERAQQLSDVTVQLNTQITALEKSDAGWFLVHKQQRLGPYKTVVVANGKSLTRFE
QTKHLQVTGFRGQVSHAPTRSKLSKLSTVLCAHGYMTPVNNALHCLGASYVKDADNLAYS
PQEQVDNLHKIQHSYLDKDWNRDIDISKHSARVGVRMVTRDHAPMMGPAPDQDAIMALYH
NHQLTPASRTFWQNTPAPVHKGLYILGGLGSRGLSSGLLAAEALAAQLCGETMPLSTDFV
ALLNPNRMWMRKLLKGKALE
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcagtgacaatattaggtctatcttagcgactaacaacagcgaacatatctcc
attgcgatgtttggattaggctctgtaagccagattttggcgctgaaaaaactgcattca
actaaaaacggttcgctaacattaaagattttctgtgctgttgatgatcatattgaacag
atatttaaggtcttatcacagactcgtccagaaattcatctcgtctcgatagaaggctgt
caacgagtgaagcttaaccatggccgtttcattattgatttccacttaggtgattatggg
cagcagttacgtcagctgccactctgcaacagcttaatatctcattggttgtgctcctct
gaatttgaaacacaatcgatgtcgcaagcgttattctggcaaatggccaaacacagccaa
gataattgtcactgcctaatatctgctgagctacccattgagagtcaacaaaagctgcta
gcactatgtgacatggttggatttacctccgaaaattcaatggtaagttcagctcaaatt
gataatgttctgttgatggagcggcacgctttgcgagctcagcagtcaagtcaacaagct
ccctacccaattaaaatagcggaaagtactactgaaatagccgtaataggtggtggaatt
gcgactgcaagtttagttttatcgctggcagaacgacagaaaaagatccatgtattttgt
gaagatagcgagttggctcaagcggcatcaggtaacaaacaaggcgctatctacccattg
ctcacacctgataataatagcttaagtcagtattttcagctggcctatctctttagtttg
catcgcctaaacgcacttgctgctaccaagtacccgatagacttcgatctctgcggcgta
ctgcatactggtcatgatgagcgaagccgaaagcgagtacagaagataatcaacggacat
ccgtggaacactgatatcgcccatgccgttaatgaaaagcaatcaagcgaaattgctggc
ttagaaattaatgaagctgggattttttaccctttaggtggctgggtcgcaccacaagat
ctcacccaagcatcatttgaacgggctcagcaattatctgatgttactgtgcaattaaac
acgcaaataacggcacttgaaaagtctgatgctggctggtttttagttcataaacaacaa
cgcctaggcccctacaaaacggtagtagttgccaacggtaagtctcttactcgctttgaa
cagactaaacatctacaagtcacaggttttagaggtcaagttagccatgcaccaacaaga
tctaagctgtctaagctcagtacggtattatgtgcacatggttacatgaccccagtgaac
aatgccttacactgtttaggcgcgagttatgttaaagatgccgacaacttagcttatagc
ccgcaagagcaagtcgataacctgcacaaaatacagcatagctatttggataaagattgg
aaccgcgacatagatatatccaagcatagtgcccgagtcggcgtacgcatggtgactcgc
gaccatgcgccgatgatgggaccggcccccgaccaggatgcaattatggcgctttatcac
aaccatcaactcacacctgcaagcagaacgttttggcaaaacacaccagcgccagttcac
aaaggtttatatatcctaggtgggctaggctctcgaggattaagctctggcttgctcgct
gcggaggcattagccgctcagctctgtggtgaaaccatgccactcagcaccgactttgtc
gcgcttttaaatccgaacagaatgtggatgcgaaagctgcttaaaggcaaggcgttagag
taa
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