Shewanella piezotolerans: swp_5055
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Entry
swp_5055 CDS
T00791
Name
(GenBank) NAD-dependent epimerase/dehydratase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
swp
Shewanella piezotolerans
Pathway
swp00540
Lipopolysaccharide biosynthesis
swp01100
Metabolic pathways
swp01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
swp_5055
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
swp01005
]
swp_5055
Enzymes [BR:
swp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
swp_5055
Lipopolysaccharide biosynthesis proteins [BR:
swp01005
]
Core region
swp_5055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
ACJ31669
UniProt:
B8CVJ3
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All DBs
Position
5275340..5276293
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AA seq
317 aa
AA seq
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MIVVTGAAGFIGSNLVKALNDMGRNDIIAVDDLTDGTKMFNLADCEIADYLDKDQFLEQI
IAGEFDGKIEVIFHQGACSSTTEWDGKFMMSNNYEYSKTLLQFCDRTKCQYIYASSASVY
GGSEKFIEQRDLEKPLNVYAYSKFLFDQYVRQQKPNCQVAGLRYFNVYGPREQHKGGMAS
VAFHFNNQLNANGICRLFEGVDGYENGQQLRDFVYVEDVVKVNLWLWQNSEVSGIFNCGT
GQAQSFNDVANAVIAHHGKGAVEYIPFPDKLKGAYQSYTQADLTKLRAAGYTAEFKTVEQ
AVPEYLSWLATQHFIGE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatagtagtcacaggtgcagcaggatttatcggcagcaatttagtcaaagcccttaac
gatatgggtcgtaatgacattattgccgtggatgatttaaccgacggtacaaaaatgttc
aatctagcggattgtgagatcgcagattatctggacaaagatcaatttcttgagcagata
atagcaggtgaattcgacggaaagattgaagttattttccatcaaggagcatgctcatcc
accaccgagtgggatggcaaattcatgatgagcaataactatgaatactctaaaacactg
ctgcagttttgtgatagaacaaaatgccaatatatctatgctagctcagcttcggtctat
ggcggtagcgagaaatttattgagcaaagagacttagaaaagccacttaatgtctacgct
tactctaaattcttgtttgaccaatatgtacgtcaacaaaagccaaactgccaagttgcc
ggcctcaggtatttcaatgtctatggcccaagagaacagcacaaaggcggcatggcaagt
gtagctttccatttcaataaccagctcaatgctaacgggatctgccgtttatttgagggg
gttgatggttatgaaaatggtcaacaactacgtgattttgtatacgttgaagatgttgtc
aaagttaatctatggttatggcaaaattctgaggtttcaggcattttcaactgcggtaca
ggccaagcacagagtttcaatgatgttgcaaacgctgttatcgcacaccacggcaaaggc
gccgtcgagtacattccattcccggataaactaaagggtgcatatcaaagctacacccaa
gcagatctaacaaagttacgagctgcaggttacaccgctgagtttaagactgttgagcaa
gctgtacctgagtatttatcttggttagcgacgcaacactttattggtgagtaa
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