Staphylococcus xylosus SMQ-121: SXYLSMQ121_1086
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Entry
SXYLSMQ121_1086 CDS
T03311
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Pathway
sxl00730
Thiamine metabolism
sxl01100
Metabolic pathways
sxl01240
Biosynthesis of cofactors
sxl04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SXYLSMQ121_1086
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SXYLSMQ121_1086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sxl03016
]
SXYLSMQ121_1086
Enzymes [BR:
sxl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
SXYLSMQ121_1086
Transfer RNA biogenesis [BR:
sxl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SXYLSMQ121_1086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
ATP_bind_3
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AID42517
UniProt:
A0A5R9B829
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Position
1193918..1195141
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AA seq
407 aa
AA seq
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MIYDHILVRYGELTLKGANRKIFVNKLRSNVKRSLMPLQGYTVKANRDRMYIELAEGADI
EEMCNRLKKVFGIYSISPVLKIDKTVEAAKELAVRFAKEYAQDDTFKIDVKRSDKNFPYD
TYELQRTLGGAVLSETDHLSVDVHNPDHVIKVEVRLDAIYMYDQVIAGSGGLPVGTGGKT
LLMLSGGIDSPVAGIEVMRRGVTVEAIHFHSPPFTSEKAKEKVIELTRILSEHVGPIKLH
IVPFTALQKQVNKEVHERYTMTTTRRMMMRVADKVVHDIGAHAIVNGENLGQVASQTLKS
MYAINHVTSTPVLRPLLTLDKEDIVKKAKDIGTFDVSIQPFEDCCTIFTPKNPVTEPELE
KVEKYESGYDFEPLVQQAADEIETLYITSDYQSEKDSATQALAEDLF
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatatacgatcatatattggttagatacggagagttaactttaaaaggagctaaccgt
aaaatatttgtgaacaaattacgttcaaatgtaaagcgttctttaatgccgttacaggga
tacacggtgaaggcaaatagagatagaatgtatatagaattagcggaaggtgcagatatt
gaagaaatgtgcaacagattaaaaaaagtctttggtatttattcaataagccctgtatta
aaaattgataaaacagtagaagcggctaaagagttagctgtccgatttgcgaaagagtat
gcacaagatgacacttttaaaattgatgtaaaacggtcggataaaaatttcccatatgac
acatatgaattgcaaagaactttaggcggagctgtactaagtgaaacggatcatttgagt
gtagatgtacacaatcctgatcatgtgattaaagtagaagtccgtttagatgccatttac
atgtatgatcaagtaattgcaggctctggcggattaccagttggtactggaggtaaaact
ttattaatgctatctggtggtattgattctccagttgccggtatagaagttatgcgcaga
ggtgttacagtagaagccatacatttccatagtccaccatttacaagtgaaaaagcaaaa
gaaaaggtaatcgaactgacgagaattttatcagaacatgttggaccaattaaattacac
atcgtgccatttacagcactacaaaaacaggtgaacaaagaagttcatgaacgttatact
atgactacaacacgtcgtatgatgatgcgtgtagctgacaaagttgtacatgatattggt
gcgcatgcgattgtaaatggcgagaatttaggtcaagttgcaagtcaaacactaaaaagt
atgtatgcaataaatcatgttacatctacaccagtattacgtcctttactgactttagat
aaagaagatattgttaaaaaggctaaagatatagggacatttgatgtatctatccaacca
tttgaggattgttgtacaatttttactcctaaaaatccagttactgaaccggaattagaa
aaagtggagaaatatgaaagtggctatgattttgaaccactagtacagcaggctgcggat
gaaattgagacattatatattacaagtgattaccaaagtgagaaagattcagctacacaa
gcgctagctgaagatttattttaa
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