KEGG   Shewanella xiamenensis: MKD32_05465
Entry
MKD32_05465       CDS       T08228                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sxm  Shewanella xiamenensis
Pathway
sxm00740  Riboflavin metabolism
sxm01100  Metabolic pathways
sxm01110  Biosynthesis of secondary metabolites
sxm01240  Biosynthesis of cofactors
sxm02024  Quorum sensing
Module
sxm_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sxm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    MKD32_05465 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MKD32_05465 (ribD)
Enzymes [BR:sxm01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     MKD32_05465 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     MKD32_05465 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: UML94769
LinkDB
Position
1250225..1251370
AA seq 381 aa
MNWSVLDNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHAL
RMAGELARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLR
DAGIQVDVGLHRDEAYALNLGFMKRMESGLPWVTVKLAASLDGKTALSNGVSKWITGPEA
RRDVQRLRLRACAIVTGIETILADDPSLNVRYSELGSLSSQLSEAQVLQPLRVVLDSRAR
MPITAALFTIESPILLVSTVSYSSDFMAQLPAHVTCLQLPAIDGRISLAALLSYLGKSCN
QVLIEAGATLAGAFIRSGLADELVLYQAMKILGGQGRNLLELPDYQMMADIPTLKLVDER
KVGADTRFTLRLESNPSLANK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgaattggtcagtactcgataaccagatgatgagccgcgccatacaactggctcgcaaa
ggattttataccactcgccccaatcccagtgtaggctgcgttatcgtaaaagataatcag
attgtcggtgaaggttatcatcaaaaagctggcgagccccacgccgaggtgcatgcactg
cgcatggctggcgagcttgcccgtggcgcgacggcttatgtcaccttagaaccttgtagc
cattatggccgcacaccgccgtgcgccttagcgctgatcaatatcggtgttaaacgtgtg
gtcgtagcggttgaagatcctaatccgcaggtcggcgggcgcggtattcaaatgctgcgc
gatgcgggtattcaagtggatgttggcttacatcgcgatgaggcctatgccttaaatctt
ggttttatgaagcgcatggagtcgggtctaccttgggtgacggtcaaactggccgcgagt
ctcgatggtaaaaccgcgttatcaaacggggtgtctaaatggatcacaggccctgaagcg
cgccgcgatgtgcagcgtttacgtttgcgcgcctgcgccatagtgactgggattgaaacc
atattggccgatgacccatccctaaatgtgcgctactcagagcttggcagtcttagctcg
caattgagtgaagcgcaggttttacaaccgctgcgagtagttttagacagtcgcgcccgt
atgcctattacggcagccttgtttacaattgaatcgccgattttattagtctcgacagtg
agctattcgtcagactttatggcgcaattacccgcccatgtgacttgcctccaattaccg
gcgattgatggtcgaatctccttagctgcactattaagctatttaggcaaaagctgtaat
caggtgcttatcgaagcgggcgcgaccttagctggcgcctttattcgctcaggattagcc
gatgaattagtgctatatcaagcgatgaaaatccttggcggccaaggacgtaatctactc
gaactacccgattatcaaatgatggccgatattccgaccctcaaactggtcgatgagcgt
aaagtgggcgcggatacgcgttttaccttgaggctcgagtccaatccatctttagcgaat
aagtga

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