Shewanella xiamenensis: MKD32_12310
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Entry
MKD32_12310 CDS
T08228
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00020
Citrate cycle (TCA cycle)
sxm00640
Propanoate metabolism
sxm00660
C5-Branched dibasic acid metabolism
sxm01100
Metabolic pathways
sxm01110
Biosynthesis of secondary metabolites
sxm01120
Microbial metabolism in diverse environments
sxm01200
Carbon metabolism
Module
sxm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sxm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MKD32_12310 (sucD)
00640 Propanoate metabolism
MKD32_12310 (sucD)
00660 C5-Branched dibasic acid metabolism
MKD32_12310 (sucD)
Enzymes [BR:
sxm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
MKD32_12310 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UML92238
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All DBs
Position
complement(2774045..2774917)
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AA seq
290 aa
AA seq
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MSVLINKDTKVICQGFTGGQGTFHSQQAIDYGTQMVGGVSPGKGGSEHLGLPVFNTVKDA
VAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLEVKVKLEETGVRMI
GPNCPGVITPGECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGG
DPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANVTKPVVSYIAGVTAP
AGKRMGHAGAIIAGGKGTAADKFAALEAAGVTTVRSLADIGKALRAKTGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtattaattaacaaagataccaaggtaatctgccaaggctttaccggtggtcaa
ggtactttccactctcaacaagctatcgattacggtacgcaaatggtcggtggtgtatct
ccaggtaaaggcggcagtgagcacttaggtctgccagtgttcaacactgtgaaagacgct
gtcgctgccactggcgcaaccgcttctgttatctacgttccagcgcctttctgtaaagac
gctatcctcgaagctatcgacggtggtattgagcttatcgtttgtatcactgaaggtatc
ccaacactggatatgctggaagtgaaagtgaagctagaagaaactggcgttcgcatgatc
ggtccaaactgcccaggtgttatcaccccaggtgaatgtaagattggtattatgccaggt
cacatccacttaaaaggtaaagtgggtatcgtttctcgttctggtacgctgacctatgaa
gcggttaagcaaaccactgacgaaggtttcggccaatctacttgcgtaggtattggtggt
gacccaattccaggcactaacttcatcgacgtattggaaatgttccaaaacgatccacag
actgaagccatcgtaatgatcggtgaaatcggtggtactgctgaagaagaagcggcagct
tatatcaaagctaacgtgactaaaccagttgtttcttacatcgcgggtgttactgctcct
gcgggtaagcgtatgggtcacgcgggtgcgattatcgccggcggtaaaggtactgctgct
gacaagtttgctgctttagaagcggcgggcgtgaccactgtccgctcgttagcggatatc
ggcaaagcgctgcgtgctaaaaccggttggtaa
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