Sphingobium sp. YBL2: TZ53_03080
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Entry
TZ53_03080 CDS
T03855
Name
(GenBank) farnesyl-diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00900
Terpenoid backbone biosynthesis
syb01100
Metabolic pathways
syb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
TZ53_03080
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
syb01006
]
TZ53_03080
Enzymes [BR:
syb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
TZ53_03080
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
TZ53_03080
Prenyltransferases [BR:
syb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
TZ53_03080
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AJR22900
UniProt:
A0A0C5XF21
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All DBs
Position
complement(635239..636159)
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AA seq
306 aa
AA seq
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MSGPDSASPRSIGLVADRAAAVAADIDRLFDALLAVPDDPRRRLHEAMRHAAMGGGKRLR
PLLVQAASDLFNISRDSALRVGVAVECIHVYSLVHDDLPAMDDDDLRRGKPTVHKAFDEA
SAILAGDCLHDLAFEVLADEETHPDPFVRVELVKALAVASGTSGMAGGQMMDLEAEKTSF
DLPTVTRLQQLKTGALIGFCVDAAAIMARIPPEGRTRLHGYARDIGLAFQIADDLLDVEG
DAVLAGKALGKDAAAGKETFVSLLGVERAREQGRLLVEQAKAHLHGFGPEADLLRAIADY
IVERDR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacccgactccgcctcgcctcggtcgattggtctggtggccgaccgcgctgcg
gcggtggcggccgacatcgaccgcctgttcgacgcgctgctggcggttcccgacgacccg
cgccggcgcctgcacgaagcgatgcgccatgcggccatgggcggaggcaagcggctgcgt
ccgctgctggtgcaggcggccagcgacctgttcaacatctcgcgggattcggcgctgcgg
gttggcgtcgcggtggaatgcatccatgtctattcgctggtgcatgacgatcttccggcg
atggacgacgacgatcttcgccggggcaagccgaccgtgcacaaggcatttgacgaggcg
tcggcgatcctcgcgggcgattgcctgcacgatctggctttcgaagtgctggcggacgag
gagacgcatcccgatcctttcgtccgggtcgagctggtgaaggcgctggccgtcgccagc
ggcaccagcggcatggcgggcggccagatgatggacctggaggcggagaagaccagcttc
gacctgcccactgtcacgcggctccagcagttgaagaccggcgcgctgatcggcttctgc
gtcgatgcggcggcgatcatggcccgcatcccgccggaggggcggacgcgcctgcacggc
tatgcccgcgacatcggccttgccttccagatcgcggacgacctgcttgacgtcgagggg
gacgccgttctcgccggcaaggcgctgggcaaggacgcggcggcggggaaggaaaccttc
gtctccctgctgggggtggagcgggcgcgggaacagggccgcctgctggtcgagcaggcg
aaggcgcatctgcacggcttcgggccggaggccgacctgctgcgcgccattgccgactat
atcgtggaaagggatcgttag
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