Sphingobium sp. YBL2: TZ53_06700
Help
Entry
TZ53_06700 CDS
T03855
Name
(GenBank) cobalamin biosynthesis protein CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00860
Porphyrin metabolism
syb01100
Metabolic pathways
syb01240
Biosynthesis of cofactors
Module
syb_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
TZ53_06700
Enzymes [BR:
syb01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
TZ53_06700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
AJR23462
UniProt:
A0A0C5XLF8
LinkDB
All DBs
Position
1432840..1436619
Genome browser
AA seq
1259 aa
AA seq
DB search
MHLLTATPGTVSNGDEAIDLGQSPGDIVLLTVADSELACFASAAHVLGQELGRAAPEIRL
ANLLQLKHPYSVDLYVEKVVAHAKFVCVILLGGKSYWPYGIDEIANIARKKGIAFAAIAD
GREDDPALRAASTVAAESCDLLRDYLRQGGIANAIAFLRNAARLAGFDAGVPDAPVPVAD
AGLYLPGVDRPTLDQVRSGWKAGQPTALFLFYRALLIAGTLDAVDRMVAGLETAGLNVLP
VHVRALREPFARDFLQGLMAEAPPDVILNATAFAASAPGEPRTPSILEQADCAILQTIFA
SAEQSAWESSARGLGPRDLAMHVALPEVDGRLFTRAVAFKAAARFDARTECSIVVPQILE
DRVSFVSQLTANWAKLRRTRVEERRVALILANYPNRDGRLGNGVGLDTPASAAAILKALA
EAGYGTDDAPTDGAALMQRMTGGITNAAPDRPGEITLSLQAYDAAFATLPQGVREAVQCR
WGAPETDPFFRAGAFHLPVHRFGRIAVAVQPSRGYHVDPKSSYHDPALPPPHAYLAFHIW
LAGDFGAHAVVHVGKHGNLEWLPGKAIALSENCFPEICAGPIPQIYPFIVNDPGEGTQAK
RRIGACIVDHLTPPLTRAESYGPLKELEALVDEYYLAAGMDPRRLETLRKDILALAASQG
LDKDSGAQGSGDEALAAIDNYLCELKEMQIRDGLHVFTQSPKGSLRRDLLMALARCPRGM
DDAGQQSLLRALADDLGLDFDPLDCTMGAPWAGPRPEALQSLTGAPWRSTGDTVERLELH
AIRLLDELEHRHSRACGDDGSCRKGAPGPRSAAVLKAIETDLAPRVDGCGEAEKAALLKA
LNGDFVAPGPSGAPTRGRPDVLPTGRNFYSVDTRAVPTVAAWNLGQRSADLIVQDYLQRE
GDYPRAIALSAWGTANMRTGGDDIAQALALMGVRPRWDWASGRVIGFEVMKIAELNRPRV
DVTFRVSGFFRDAFPEQIDLIDSAARAVMALDEPDEDNPAAAHHRIETAALIAQGTPEKA
ARRRAGSRVFGSKPGAYGAGLQAMIDEKIWHDRSDLANVYLDWGSYAYGGGVEGDSERSL
FAQRLTEADALIQNQDNREHDLLDSDDYYQFEGGIAAAVEHLSGRRPLSYHNDHSRPERP
VIRTLEDEIGRIVRARVANPKWIAGMMRHGYKGAFEIAASVDYLFAFAATTHAVKDHHFD
AVHAAFIEDEAVRAFMAEANPAALRETAARLHEALDRALWKPRSNSAAMLLSQLKDAPQ
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgctgaccgccacgcccggcaccgtctccaacggcgacgaagccatcgacctc
ggccagtcgccgggcgacatcgtgctgctgaccgtggcagacagcgaacttgcctgtttc
gcgagcgcagcccatgttctggggcaggaactgggcagggcggcgcccgaaatccggctg
gccaatctcctccagctcaagcacccctattccgtcgatctgtatgtcgaaaaggtcgtc
gcccacgccaaattcgtctgcgtcatcctgctgggcggcaagagctattggccctatggc
attgatgagattgcaaatatcgcccgaaaaaagggcatagcctttgcggcgatcgccgat
gggcgagaggatgaccccgcgttgcgcgccgcatcgaccgtcgcggcggagagctgcgat
ctcctgcgcgactatctgcggcagggcggcattgccaacgccatcgccttcctgcgcaac
gccgcccgccttgccggcttcgacgcgggcgttcccgatgcgcccgttccggtggccgac
gcgggcctctatttgcccggcgtcgatcgaccaacgctggatcaggtcaggagcggatgg
aaggcagggcagccgacagccctcttcctcttctaccgcgcgctgctgatcgcgggcacg
ctggacgccgtggaccgcatggtcgcgggattggagacggcgggcctcaacgtccttccc
gtccatgtgcgcgccttgcgcgaacctttcgcccgggacttcctgcaagggctgatggcg
gaggcgccgccggacgtcatcctcaacgccaccgcctttgccgccagcgcgccgggcgag
ccgcgcacgccctccatcctcgaacaggcggattgcgcgatcctccagacgatcttcgcc
agcgccgaacagagcgcctgggagtcgagtgcccgcgggcttggcccccgcgacctcgcc
atgcatgtcgcgctgccggaggtggacggccgcctcttcacccgcgcggtcgccttcaag
gctgcggcacggttcgatgcccgcacggaatgcagcatcgtcgtgccccagatactggaa
gatcgtgtcagcttcgtatcccaacttactgcaaattgggctaaacttcgtagaacgcga
gtggaggaacgtcgggtcgcgctcatcctcgccaactatcccaacagggatggccgcctc
ggcaatggcgtcggcctggatacgcccgccagtgccgccgccattctgaaggccctggcg
gaagcaggctacggaacggatgatgcgcccaccgacggcgccgcgctgatgcagcgcatg
acaggtggcatcaccaatgccgcgccggaccgtccgggtgaaatcaccctctcgctccag
gcctatgacgcagccttcgccacgttgccccaaggggtccgcgaagcggtccaatgccgc
tggggcgcgcccgaaaccgatcctttcttccgcgctggcgccttccatctgccggtgcac
cgcttcggccggatcgcggtcgccgtgcagccgtcgcgcggttatcatgtcgatcccaag
agcagctatcacgacccggcgctgcccccgccccatgcctatctcgccttccatatctgg
ctggccggcgatttcggtgcccatgccgtcgtccatgtcggcaagcacggcaatctcgaa
tggctgccgggcaaggcgatcgcgctgtccgaaaactgctttccggaaatctgcgccgga
ccgatccctcaaatctatccgttcatcgtcaacgatcccggcgaaggcacccaggccaag
cgtcgcatcggcgcctgcatcgtcgaccatctgacgccgccattgacccgcgccgagagc
tacggcccgctcaaggaactggaggctctggtcgacgaatattatctcgccgccggcatg
gacccacgccggctggaaacgctgcgcaaggacattctggccctcgccgcctcgcaaggg
ctggacaaggattcaggcgcgcagggaagcggagacgaggctttagcagcgatcgacaac
tatctgtgcgaactcaaggaaatgcagatacgcgacgggctgcacgtcttcacgcaaagc
ccgaagggttcgcttcgccgcgacctactcatggcccttgcccgctgcccaaggggtatg
gacgatgccggccagcagtccctgctccgtgcgctggcggatgatctggggctggatttc
gacccgctcgactgcacgatgggcgcgccttgggccggaccccggccggaagcgctgcaa
agcctgacaggagcaccttggcgcagcacgggcgacacggtggaacggctggaacttcac
gccatccgcctgctcgatgagttggaacatcgtcattcccgcgcgtgcggggatgacggc
agttgccggaaaggcgctcccggtccacggagcgctgcggttctcaaggctatcgaaacc
gatctcgccccgcgcgtcgatggctgcggagaggccgaaaaagccgcactcctcaaagcc
ctcaacggcgatttcgtcgccccgggcccttccggagcgcccaccaggggtcgccccgac
gtcctccccaccgggcgcaatttctattcggtcgacaccagggccgtgcccacggtggcg
gcatggaatctcgggcagcgctccgccgatctcatcgtgcaggactatctccagcgcgag
ggcgactatccccgcgccatcgccctttccgcctggggcaccgccaatatgcggaccggc
ggcgacgacatagcgcaggcgctggccctgatgggcgtccggcctcgctgggactgggct
tcgggccgggtcatcggtttcgaggtcatgaagatcgcggaactgaaccgcccccgcgtc
gacgtcaccttccgcgtgtccggcttcttccgcgacgccttcccggaacagatcgacctg
atcgacagcgccgcccgcgccgtcatggcgctggacgagccggacgaggacaatccagcc
gccgcccaccaccgcatcgaaaccgccgcgctgatcgcgcagggcacgccggaaaaggcc
gcgcggcgccgcgcgggaagccgcgttttcggttcgaaaccgggcgcctatggcgccggc
ctccaggcgatgatcgacgagaagatctggcacgaccggtcggaccttgccaatgtctat
ctcgactggggcagctatgcctatggcggcggggtggaaggcgacagcgaacgcagcctc
ttcgcgcagcgcctgaccgaagccgacgcgctgatccagaatcaggacaatcgcgagcac
gacctgctcgacagcgacgattactaccagttcgaaggcggcatcgccgccgcggtcgag
catctctccggcaggaggccgctcagctatcataacgaccacagccgtcccgaacgtccc
gtcatccgcacgctggaggacgagatcggccgcatcgtccgcgcccgcgtcgccaacccc
aaatggatcgcgggcatgatgcgccacggctacaagggcgcgttcgagatcgcggcctcc
gtcgactatctcttcgccttcgccgcgaccacccatgcggtgaaggaccatcatttcgac
gcggtccacgccgccttcatcgaggatgaggcggttcgcgccttcatggcggaagccaat
ccggccgccctgcgggagaccgccgcccgccttcacgaagcgctggaccgcgccctttgg
aaaccccggtcgaacagcgccgccatgcttctctcccaactcaaggatgccccgcaatga
DBGET
integrated database retrieval system
