Sphingobium sp. YBL2: TZ53_19145
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Entry
TZ53_19145 CDS
T03855
Name
(GenBank) decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00330
Arginine and proline metabolism
syb00480
Glutathione metabolism
syb01100
Metabolic pathways
syb01110
Biosynthesis of secondary metabolites
syb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
TZ53_19145
09106 Metabolism of other amino acids
00480 Glutathione metabolism
TZ53_19145
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
TZ53_19145
Enzymes [BR:
syb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
TZ53_19145
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AJR25534
UniProt:
A0A0C5X8I3
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Position
4158600..4159793
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AA seq
397 aa
AA seq
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MHKHHSALGVATALKPAAPVTLIRPQAAARAARFFSEKFPGRSLYAVKANPSPDLIRTLF
ASGITHFDVASIAEVRLVAETLQGEGKLCFMHPVKAEEAIAEAYHIHGVRTFSLDTLDEL
AKIMRATNDATDLELCVRLRVSSEHSELSLASKFGAELGETRELLMATRQAADALGICFH
VGSQAMSPQAYSDAIERVRAAIVDAAVTVDIIDVGGGFPSIYPGMEPVALENYFDAIHRG
FESLPISYSAELWCEPGRALSAEYSSVVVRVERRRGTELYINDGAYGALFDAAHIGWRFP
VALLREEESEAELTGFSFYGPTCDDMDHMVGPFMLPDDVQAGDYIEIGMLGAYGAAMRTG
FNGFTSEAVVEVEDEPMASLYVDAIPVRRRATVIKLG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
ttgcacaagcatcatagcgcgctgggggtagcgaccgccctcaaaccggcagcaccggta
acgctgatccgtccccaggctgcggcccgggccgcccgattcttctctgagaagtttccg
gggcgctcgctctatgcagtcaaggcgaatccgtctcccgatctgatccgcaccctcttc
gcttccggcatcacgcatttcgacgtggcgtccattgcggaggtgcgcctggtggcggag
acgctgcagggcgaaggcaagctttgcttcatgcacccggtcaaggccgaggaagcgatt
gcagaggcctatcacatccatggcgtgcgcaccttctcgctcgacacgctggacgagctg
gcgaagatcatgcgcgccacgaatgatgcgaccgatcttgaactgtgcgtgcgcctgcgc
gtttcctccgaacattcggaactcagccttgcgtccaaattcggcgcggaactgggcgag
acccgcgaactgctgatggcgacccgccaggcggccgatgcgctgggcatctgcttccat
gtcggcagccaggcgatgagcccgcaggcctatagcgacgccatcgaacgcgtgcgcgcc
gccattgtcgacgcggctgtcacggtcgacatcatcgatgtcggcggcggcttcccgtcc
atctatcccggcatggagccggtcgcgctcgaaaattatttcgacgcgatccaccgcggt
ttcgagagcctgccgatcagctattcggccgaactatggtgcgagcccggccgcgccctt
tccgccgaatacagttcggtcgtcgtgcgcgtcgaacgccgccgcggcacggaactctat
atcaacgacggcgcctatggcgcgctgttcgacgcggcgcatatcggctggcgcttccct
gtggccctgctgcgcgaggaagagagcgaggcggaactgaccggcttctccttctatggc
cccacctgcgacgacatggaccatatggtcggccccttcatgctgccggacgacgtgcag
gcgggcgactatatcgaaatcgggatgctcggcgcctatggcgctgcgatgcgcaccggc
ttcaacggcttcacatccgaagccgtggtggaggtggaggatgagccgatggctagcctc
tatgtcgatgcgattccggtccgccgtcgcgcaactgtcatcaagctggggtag
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