Sphingobium sp. YBL2: TZ53_20890
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Entry
TZ53_20890 CDS
T03855
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syb03009
]
TZ53_20890
Enzymes [BR:
syb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TZ53_20890
Ribosome biogenesis [BR:
syb03009
]
Prokaryotic type
ribosomal protein modification factors
TZ53_20890
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
AJR26539
UniProt:
A0A0C5XAY6
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Position
4522479..4523846
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AA seq
455 aa
AA seq
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MATKIPEAPKVGMVSLGCPKALVDSERILTKLRSDGYQMSADYAGADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVIVTGCMGNEAELIRQKFPQVLAVTGAHQYEAVVNAVHEASPP
IPNAFVDLVPEGGLKLTPRHYSYLKISEGCNHRCSFCIIPSLRGDLVSRRIDAVLREAEK
LVHAGTRELLIISQDTSAYGVDTRHEARQWKGREVRAHMTDLARELGQLRTADGTPPWVR
LHYVYPYPHVDQVIPLMADGLLTPYLDNPFQHAAPSVLKAMKRPANEAKVLDRIRKWRDI
CPDIAIRSSFVVGFPGETEADFDYLLQWLDEAQLDRVGAFRFEPVEGAAANDLPGAVPEE
VKEERYQRIMEKTAAISAARLQAKVGRVLPVIIDEVGEADEDGSIGATARSQADAPEIDG
NVFLRDVGEGLQPGSILNVLIEDADEHDLYGVPSV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaaattcccgaagcgccgaaggtcggcatggtgtcgctgggctgtcccaag
gcgctggtcgacagcgagcgcatcctgaccaagctgcgttccgacggctatcagatgtcc
gccgactatgccggcgccgacgtcgtgctggtcaacacctgcggtttcctcgattcggcc
aaggaagaatcgctggaagccattggagaggcgattgcggagaatggccgggtcatcgtc
accggctgcatgggcaatgaagcggaactgatccgtcagaaattcccgcaggtgctggcc
gtcaccggcgcgcatcaatatgaggcggtggtgaacgcggtgcatgaggcgtcgccgccc
atccccaacgccttcgtcgatctggtgccggagggtgggctcaagctgaccccgcgccac
tacagctatctgaagatttcggagggctgcaaccatcgctgctccttctgcatcatcccc
tcgctgcgcggcgatctggtcagccggcgcatagacgctgtgctgcgcgaggcggaaaag
ctggtgcatgccggaacccgggaactgctgatcatcagccaggacacctccgcttacggg
gtcgacacccggcatgaggcgcgccagtggaaggggcgcgaggttcgcgcgcacatgacc
gatctggcgcgcgaactggggcagcttcgcaccgccgatggcacgccgccctgggtccgt
ctgcactatgtctatccctatccccatgtggatcaggtgatcccgctgatggccgatggg
ctgctgaccccctatctcgacaatcccttccagcacgccgcgccttctgtcctcaaggcc
atgaagcgcccggcgaacgaagcgaaggtgctggaccgcatccgcaaatggcgggacatc
tgcccggacatcgcgatccgttcctccttcgtcgtcggctttcccggcgagacggaggcg
gatttcgactatcttctccagtggctggacgaggcgcagctcgaccgcgtgggagccttc
cgcttcgaacctgtggagggcgcggcggccaacgacctgcccggcgccgtgccggaagag
gtcaaggaagaacgctatcagcggatcatggagaagaccgccgccatttccgccgcacgg
ttacaggcgaaggtcggccgcgtgctgcccgtcatcatcgacgaggtgggcgaagcggac
gaggacggctccatcggcgcgaccgcgcgcagccaagccgacgcaccggaaatcgacggc
aatgtcttcctgcgcgacgtgggcgaaggcttgcagccgggcagcatcctgaacgtgctg
atcgaggatgccgacgagcatgacctttacggagtgccgtcggtttag
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