Synechococcus elongatus PCC7942: Synpcc7942_2062
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Entry
Synpcc7942_2062 CDS
T00300
Name
(GenBank) lycopene cyclase (CrtL-type)
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
syf
Synechococcus elongatus PCC7942
Pathway
syf00906
Carotenoid biosynthesis
syf01100
Metabolic pathways
syf01110
Biosynthesis of secondary metabolites
Module
syf_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
syf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Synpcc7942_2062
Enzymes [BR:
syf01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
Synpcc7942_2062
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
Thi4
FAD_binding_2
NAD_binding_9
FAD_binding_3
Trp_halogenase
NAD_binding_8
HI0933_like
GIDA
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ABB58092
CyanoBase:
Synpcc7942_2062
UniProt:
Q55276
LinkDB
All DBs
Position
complement(2138585..2139820)
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AA seq
411 aa
AA seq
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MFDALVIGSGPAGLAIAAELAQRGLKVQGLSPVDPFHPWENTYGIWGPELDSLGLEHLFG
HRWSNCVSYFGEAPVQHQYNYGLFDRAQLQQHWLRQCEQGGLQWQLGKAAAIAHDSHHSC
VTTAAGQELQARLVVDTTGHQAAFIQRPHSDAIAYQAAYGIIGQFSQPPIEPHQFVLMDY
RSDHLSPEERQLPPTFLYAMDLGNDVYFVEETSLAACPAIPYDRLKQRLYQRLATRGVTV
QVIQHEEYCLFPMNLPLPDLTQSVVGFGGAASMVHPASGYMVGALLRRAPDLANAIAAGL
NASSSLTTAELATQAWRGLWPTEKIRKHYIYQFGLEKLMRFSEAQLNHHFQTFFGLPKEQ
WYGFLTNTLSLPELIQAMLRLFAQAPNDVRWGLMEQQGRELQLFWQAIAAR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgatgccttagtgatcgggtcggggccagccggactggcgatcgcggcagagctg
gcacagcgcggcttgaaagtccaaggactatcccccgtcgacccattccatccttgggaa
aatacctacggcatctggggacccgagctggatagtcttggcctcgagcatctctttggg
catcgctggtcgaactgcgttagctacttcggtgaggcgccggttcagcaccaatacaac
tacgggctgtttgatcgcgcccaactacaacagcactggttgcggcaatgtgagcaaggc
ggcctgcaatggcaactcggcaaagcagctgcgatcgcccatgactcccaccattcctgc
gttacgacagcagcagggcaggagttacaggcgcggctggttgtcgatacgactgggcac
caagcggcttttatccagcgacctcattcagacgcgatcgcctaccaagcggcctacggc
atcattggccagttttcgcagccgccgatcgagccccatcagtttgtgctgatggactac
cgcagcgaccatctctcacctgaagaacgccaactgccaccgacctttctctacgcgatg
gatctcgggaacgacgtctactttgtagaggaaacatcgctggcggcttgcccggctatt
ccctacgatcgcctcaaacaacggctctatcaacgcttagccactcgcggtgtgacggtg
caagtgattcagcacgaggaatattgcctgtttccgatgaatttgccgctgcccgatctc
actcagtcagtggttggctttgggggggcggccagtatggtgcatcccgcttcgggctac
atggtcggggcgctactgcggcgcgctcctgatctggcgaatgcgatcgcggctggactg
aatgccagttccagtctgaccacggcagaacttgctacccaagcctggcgaggactctgg
ccaaccgaaaaaattcgcaagcactacatctaccaattcggcctcgaaaagctgatgcgc
ttttccgaagcccagctcaatcatcacttccagaccttctttggcctgccgaaggagcag
tggtacggctttttgaccaatacgctgtcgctaccggagctgattcaagcgatgctcaga
ttatttgcccaagcgccgaatgatgtgcgctggggtctgatggaacaacaaggtcgcgaa
ttacaactcttttggcaagcgatcgcggcccgctag
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