Sediminicola sp. YIK13: SB49_02445
Help
Entry
SB49_02445 CDS
T04145
Name
(GenBank) capsule biosynthesis protein CapI
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00053
Ascorbate and aldarate metabolism
syi00520
Amino sugar and nucleotide sugar metabolism
syi00541
O-Antigen nucleotide sugar biosynthesis
syi01100
Metabolic pathways
syi01240
Biosynthesis of cofactors
syi01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
SB49_02445
00520 Amino sugar and nucleotide sugar metabolism
SB49_02445
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SB49_02445
Enzymes [BR:
syi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
SB49_02445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
NAD_binding_10
Ldh_1_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
ALM06790
UniProt:
A0A0S1S8T0
LinkDB
All DBs
Position
complement(533682..534710)
Genome browser
AA seq
342 aa
AA seq
DB search
MKILVTGAAGFIGFHVALNLVQKGHEVLGLDNINGYYDTKLKFARLNLLGISQIDATPFN
IVCSSQLHGGNFRFVRMDIENREKLPKLFRKEKFDIVCNLAAQAGVRYSLENPEVYVDSN
VVGFLNILECCRHFKIKHLVYASSSSVYGLNKNIPFKIEDSVDKPISLYAATKKSNELMA
HSYSNLFGIPTTGLRFFTVYGPWGRPDMALFLFTDAIAKNKPIKVFNNGQMARDFTYIED
IVEGVIRVIEGDLNERITTENLYKLYNIGNNKAVKLLDFIKEIESNLKKTAIKEMLPMQS
GDVENTWANIDDLIKDYNYYPKTSVKIGVKNFVLWFKEYYKL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatattagttaccggagctgcaggatttattggttttcatgttgcattaaactta
gtgcaaaaaggacatgaggtgttaggcctagacaatataaatgggtattacgacaccaaa
ttaaaatttgctagattaaatcttctaggtatttctcaaattgatgcaacgccatttaac
attgtttgttcaagtcaattgcatggaggtaattttcgttttgttagaatggatattgaa
aatcgggaaaaactaccaaaattatttagaaaagaaaaatttgatattgtctgtaatcta
gctgcgcaggcaggggtgcgttatagcttagaaaaccctgaagtatatgtagatagtaat
gtggttggttttctaaacattttagaatgttgcagacactttaaaattaaacacttagtt
tatgccagtagttcgagtgtttatggactaaataaaaacatcccctttaaaatagaggat
tctgttgacaaacctataagcctttacgcagctaccaaaaagagcaatgaactaatggca
cattcctacagtaatctatttggaataccaacaacagggcttcgattctttactgtatat
gggccatggggaagacctgacatggctctttttttgtttacagatgctattgctaaaaac
aagccaataaaggtgtttaacaatggacaaatggcaagggattttacttatatagaggat
atagttgaaggagttatccgggttattgaaggtgatttaaatgaaagaattaccacagaa
aatttatataaattatacaatatcggaaataataaagctgttaaattgttagatttcata
aaagaaatagaatctaatcttaaaaaaacagccataaaagagatgctccccatgcaatcc
ggagatgtagagaatacatgggcaaacattgatgatttaattaaagattataattattac
cctaaaacatctgtgaaaattggggttaaaaattttgtattatggttcaaagagtattac
aaattataa
DBGET
integrated database retrieval system
