Sediminicola sp. YIK13: SB49_11095
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Entry
SB49_11095 CDS
T04145
Name
(GenBank) polyprenyl synthetase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00900
Terpenoid backbone biosynthesis
syi01100
Metabolic pathways
syi01110
Biosynthesis of secondary metabolites
Module
syi_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SB49_11095
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
syi01006
]
SB49_11095
Enzymes [BR:
syi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SB49_11095
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SB49_11095
2.5.1.29 geranylgeranyl diphosphate synthase
SB49_11095
Prenyltransferases [BR:
syi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SB49_11095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ALM08286
UniProt:
A0A0S1SD92
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All DBs
Position
complement(2483660..2484634)
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AA seq
324 aa
AA seq
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MLTIDQYRSEFINHLEAKTTTREPENLYAPISYILGLGGKRLRPILTLMTADIFGKDYKE
AMDAALAVEVFHNFSLVHDDIMDDAPLRRGKITVHEKWDINTGILSGDAMLISAIQYFER
YEGQVYKDLLKLFSKTALEVCEGQQYDVDFEDREDVTIPEYIKMIEYKTAVLVAAAMKMG
AIIAGASLESQYAIYEFGRYLGIAFQLQDDYLDAFGDPKAFGKQVGGDIIENKKTFLYLK
SLEMVTPQQAQELAHLFSIKPKDATAKITTVKDIFLESTAAQQTKDEIEKYTNNAFSILD
KLDISPEKKEILHRFGESLMKRKV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccatagatcaataccgttcagaattcatcaatcatttagaggctaaaactact
accagagaacctgaaaatttatatgctcctatcagctatattttaggcttggggggtaag
cgtttgcgacctatcctgacattgatgacagcagatatttttgggaaagattacaaggaa
gccatggatgcagccttggcggtggaggtttttcataatttttcattggttcatgacgat
atcatggacgatgccccgttgcgaagaggaaaaattacagttcatgaaaagtgggatata
aacacggggatcctttctggagatgcaatgctcatcagtgccatccaatattttgaacgt
tatgaaggacaggtttacaaagaccttttaaaattgttcagtaaaacggcattggaggtt
tgtgagggacaacagtatgatgtagattttgaggatagggaagatgtgacgatccctgaa
tatattaaaatgattgaatataaaacagcggtactggttgctgctgccatgaaaatgggc
gccattattgcaggagcttccttggaatcccagtatgctatatatgaattcggaaggtat
ttgggaatcgcatttcagttacaagatgattatttggacgcttttggtgatcccaaggca
tttgggaaacaggtagggggtgatattatagaaaataaaaaaacattcttgtacctcaag
tccttggaaatggtaacgcctcaacaggcccaagaattggcgcatttgttttcgattaag
ccaaaggatgcaacagcaaagatcactaccgtaaaagatatatttttggaaagtactgct
gcccaacagaccaaggatgaaattgaaaaatacaccaataatgcattttctattttggat
aaattagatatttctccagaaaagaaagaaattctccaccgttttggagaaagcctcatg
aagcgaaaagtatag
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