KEGG   Shewanella yunxiaonensis: KDN34_04680
Entry
KDN34_04680       CDS       T07775                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
syk  Shewanella yunxiaonensis
Pathway
syk00740  Riboflavin metabolism
syk01100  Metabolic pathways
syk01110  Biosynthesis of secondary metabolites
syk01240  Biosynthesis of cofactors
syk02024  Quorum sensing
Module
syk_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:syk00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    KDN34_04680 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KDN34_04680 (ribD)
Enzymes [BR:syk01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     KDN34_04680 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     KDN34_04680 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: QUN06749
LinkDB
Position
1000194..1001318
AA seq 374 aa
MWSTIDITMMSRAIMLARRGRYTTRPNPNVGCVIVDANGVIVGEGWHQRAGGPHAEVHAW
RMAGDKARGATAYVTLEPCSHYGRTPPCANGLIAQGLKRVVIAMTDPNPQVAGRGIAMLQ
AAGIDVCSGLLADEARKLNPGFLSRMERGRPYVTVKLAASLDGKTALANGESKWITGPAA
REDVQRLRALSCAVVTGIDTVLADDPSMNVRYQQLGYLQQQLDEDELIQPLRVVLDSRCR
MPATARMLSLPGQTLLVSCQAYPAEFMRTLPANVQCLQLPDVAGRIDLSALLQYLATSCN
SVLVEAGATLCGAFISNALADELVLYQAPKILGASGRNLLQLPQYQQLSDLPSLQLIEQR
KVGVDNRLTLKLGD
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgtggtcgaccattgatatcaccatgatgagccgggctatcatgctggctcgtcgtggc
cgttataccacccgccctaatcctaatgtcggttgcgttatcgttgatgccaacggcgtg
attgtgggggaaggctggcatcaacgtgcgggcgggccgcatgccgaagtccatgcttgg
cgcatggcgggtgacaaagcgcgaggggcgaccgcctatgtcacgctggagccgtgcagt
cattatggccggacaccgccctgtgccaacggtttaattgcgcaggggctgaagcgggtg
gtgattgccatgactgaccctaatccccaggtcgccgggcgtggcatcgccatgttgcaa
gctgccgggattgacgtttgctcaggattactcgctgatgaagcgcgcaaactgaatccg
gggttcctgtcgcgaatggaacgtggccgaccatacgtcacggtgaaactcgcggcgagt
cttgatggcaagaccgcgttggcaaatggcgagtccaaatggattaccgggccagcggca
cgcgaagatgtacagcgactacgggcgttaagctgcgctgtcgttaccggcattgataca
gtgttggctgatgatccctcaatgaatgtgcgatatcagcaattgggctacttacagcag
caacttgatgaagatgaactcatacaaccgctgcgtgtggtgctggatagccgctgccgg
atgccggcgactgcgcgtatgctgtctttgccggggcaaactctgctggtcagttgtcag
gcgtaccccgcagaatttatgagaacactgccagcaaatgtacagtgtttacaattaccc
gatgtggccggacgcatagatctcagcgccttgttgcagtatttggcaacgagttgtaac
tcggtgctggtggaagcgggcgcaactttgtgtggtgcatttatcagtaatgcgctggcg
gatgaattggtgttgtatcaggcaccgaaaattcttggtgccagcgggcgcaacttgttg
caactgccacagtatcaacagttatcggacctcccatcgctacaattaatagaacaacgt
aaagtaggtgtcgataatcgcctgacgctgaaactaggggattaa

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