Shewanella yunxiaonensis: KDN34_11495
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Entry
KDN34_11495 CDS
T07775
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00730
Thiamine metabolism
syk01100
Metabolic pathways
syk01240
Biosynthesis of cofactors
syk04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
KDN34_11495 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
KDN34_11495 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syk03016
]
KDN34_11495 (thiI)
Enzymes [BR:
syk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
KDN34_11495 (thiI)
Transfer RNA biogenesis [BR:
syk03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
KDN34_11495 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Diphthami_syn_2
Motif
Other DBs
NCBI-ProteinID:
QUN04859
LinkDB
All DBs
Position
complement(2519763..2521217)
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKPVRLRFTKMLESNIRNVLKKVDEGVTVVRQWDRIMVGVPQDKPE
LLDSVGERLTCIPGIATVARVNEYTFQTVHDIYLHTLKAFGDELAGKTFCVRVKRSGHHD
FTSIDVEKYVGGGLNQHTEAAGVKLKNPEITVNLEINNDKLYLVEKKVSGLGGFPMATQE
DVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGAQHEIGVKQVAHHLWQTYGESHRVK
FVTIPFEPVVAEILERIDNGLMGVILKRCMMRAASRVAERMGIQALVTGESLGQVSSQTL
TNLNVIDRCTDTLILRPLITMDKQDIINESRKIGTEDFAKSMPEYCGVISQRPTVKAVLA
KVEAEELKFSPDMLDKVLEAAEVIDIREIPKAMDTKVTETETVSSVGAEQVVLDIRAPEE
EERHPLAVAGAEVLHIPFFKLSSAFAELDSSKTYLLYCDRGVMSKLQALYLLEQGYDNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcgttaagctgtaccccgaaatcatgatgaagagcaagccagtacgtttg
cgcttcactaaaatgctggaatctaatatccggaatgtactgaaaaaagttgatgaaggt
gtcactgtggtaagacagtgggaccgcatcatggtcggggtaccacaggacaaaccagaa
ctgctggacagtgttggcgaacgcctgacttgtatcccagggatcgcgactgttgctcgt
gtaaatgaatacaccttccaaactgtacacgatatctatctgcataccttgaaagccttt
ggcgatgaactggcaggtaagaccttctgtgtccgggttaagcgtagcggacatcatgat
ttcacctctattgacgtggaaaaatatgttggcggtggactgaatcagcatacagaagct
gccggtgtaaaactcaagaacccggagatcactgttaatctggagattaacaacgataag
ctgtatctggtggagaaaaaagtatcgggtcttggtggcttcccgatggcgactcaggaa
gatgtgttgtcattgatctctggtggtttcgattccggggtgtccagcttccagtttatt
aagaaaggggctcgtacccattactgctttttcaatctcggtggtgcgcagcatgaaatc
ggcgtgaagcaggtggcgcatcatttgtggcaaacctatggtgaatcccatagagttaaa
tttgtcaccattccttttgaaccggtagtggcagaaattttggaacgtattgataacggc
ctgatgggggttatcttgaaacgttgcatgatgcgtgcggcgagtcgggtggctgaacgc
atgggaattcaagcgttagtgacaggcgaaagtctggggcaggtgtccagtcagaccctg
actaacctcaatgtgattgaccgttgtactgataccttgatcctgcggccacttattacc
atggataagcaagatatcatcaatgagagccgcaaaattggtactgaagattttgctaaa
tcgatgccagaatattgtggtgttatttctcagcggccaacggtaaaagcagtattggca
aaagtagaagctgaagaacttaaattttctccggacatgctggataaagtcctggaagct
gcagaagtgattgatatccgggagataccaaaagcaatggataccaaagtaaccgaaaca
gaaactgtctccagcgtcggcgctgagcaggtggtgctggatatccgcgcccctgaagag
gaagaacgtcatccattggcggtggctggcgctgaggtgcttcatattccattctttaag
ttatccagtgcatttgcggagctcgatagcagcaagacttacctgctttattgtgaccgc
ggggtaatgagtaaactgcaagccttgtatttattggaacagggctatgacaatgtgaag
gtttatcgaccttaa
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