Synechococcus sp. CB0101: CB0101_11080
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Entry
CB0101_11080 CDS
T06409
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sync
Synechococcus sp. CB0101
Brite
KEGG Orthology (KO) [BR:
sync00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sync03009
]
CB0101_11080 (rimO)
Enzymes [BR:
sync01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CB0101_11080 (rimO)
Ribosome biogenesis [BR:
sync03009
]
Prokaryotic type
ribosomal protein modification factors
CB0101_11080 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
TK
Motif
Other DBs
NCBI-ProteinID:
QCH15401
UniProt:
A0A4P7ZUF8
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All DBs
Position
complement(2068912..2070300)
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AA seq
462 aa
AA seq
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MSQTSTKPTVAFAHLGCEKNRVDTEHMLGLLAQAGYGVSADESDANVVVVNTCSFIQDAR
EESVRTLVELAEQGKELIIAGCLAQHFQDELLESLPEAKAIVGTGDYQHIVSVLERVEAG
ERVKQVSANPTFVADEHLPRYRTTSEAVAYLKVAEGCDYRCAFCIIPHLRGDQRSRTIES
IVAEAQQLAAQGVKELVLISQITTNYGLDLAGKPQLAELLRALGEVEIPWIRVHYAYPTG
LTEAVLEAYREVPNVLPYLDLPLQHSHPEVLRAMNRPWQADVTGGVLRRIREQLPDAVLR
TTFIVGYPGETEEHFQHLLDFVAEQRFDHVGVFTFSPEEGTPAAELPDQVPAEVAAERKD
RLMALQQPIAAERNAAWVGRIVDVLIEQENPGTGEMIGRCARFAPEVDGEVRVMPGEGGL
CAAPGTMVPVRITAADTYDLIGEVVGARAMVSDALAARQADS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaccagcaccaaacccaccgtggcgtttgcccatctgggctgcgagaaaaac
cgggtggataccgagcacatgctcggactgttggcccaggcgggctatggcgtgagcgcc
gatgaaagcgacgccaacgtggtggtggtgaacacctgcagcttcatccaggacgcccgc
gaggaatcggtgcgcaccttggtggaactggcggagcagggcaaggagctgatcattgcg
ggctgcctggcccaacacttccaggacgaactactcgaaagccttccggaagccaaggcg
atcgtgggcaccggcgattaccagcacatcgtgagcgtgctggagcgcgtggaagccggc
gaacgggtgaagcaggtgagcgccaaccccaccttcgtggctgatgagcacctgccccgc
taccgcaccaccagcgaggcggtggcctacctcaaggtggccgagggctgcgactaccgc
tgcgccttctgcatcattccccacctgcgcggcgaccagcgctcccgcacgattgagagc
atcgtggccgaagcccaacagctggcagcccagggggtgaaggagctggtgctgatcagc
cagatcaccaccaactacggcctcgacctggctggaaagccacaactggccgaactgctt
cgggccctgggcgaggtggagatcccctggatccgcgtgcactacgcctatcccaccggc
ttaaccgaagcggtgctcgaggcttaccgcgaggtgcccaatgtgctgccttacctggat
ctgccgctgcagcacagccatcccgaggtgctgcgcgcgatgaatcgcccctggcaggcg
gatgtaaccggaggggtgctgcgccgcatccgcgagcagctgcccgatgcggtgctgcgc
accaccttcatcgtgggctatccgggcgaaaccgaagaacacttccagcatctgctcgat
ttcgtggcggagcagcgctttgaccacgtgggtgtgttcaccttctcccccgaagagggc
actcccgccgccgaactgccggatcaggtgccggccgaggtggccgccgagcgcaaagac
aggctgatggccctccaacagccgatcgccgctgagcgcaacgccgcctgggtgggccgg
atcgtggatgtgctgatcgagcaggaaaacccaggcaccggcgagatgatcggccgttgc
gcccgcttcgcacctgaagtggatggggaagtgcgggtgatgcccggcgaaggcggcctt
tgcgccgccccgggcacgatggtgccggtgcgcatcaccgccgccgacacctacgacctg
atcggtgaagtggtgggagcccgggcgatggtgagcgacgcgctcgcggcccgtcaggcg
gactcttga
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