Synechococcus sp. RCC307: SynRCC307_1140
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Entry
SynRCC307_1140 CDS
T00523
Symbol
menD
Name
(GenBank) Menaquinone biosynthesis protein MenD (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / 2-oxoglutarate decarboxylase)
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
syr
Synechococcus sp. RCC307
Pathway
syr00130
Ubiquinone and other terpenoid-quinone biosynthesis
syr01100
Metabolic pathways
syr01110
Biosynthesis of secondary metabolites
syr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
SynRCC307_1140 (menD)
Enzymes [BR:
syr01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
SynRCC307_1140 (menD)
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Motif
Pfam:
TPP_enzyme_N
TPP_enzyme_M_2
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
CAK28043
CyanoBase:
SynRCC307_1140
UniProt:
A5GT34
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Position
1005947..1007671
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AA seq
574 aa
AA seq
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MSIEAAENLRAAEALLSALMGLGLQRVVLCPGSRSGPLALAASRLESHGLALTTGIDERS
AGFFALGQTRADGQPTAVITTSGTAVANLLPAAVEADFSALPLLLLTADRPERLKACGAN
QTVNQEAYLQPACRALLQGPAAGLHDASDERLLRLAQSAMRHALGAPAGPVHLNLAFDEP
LHADLSGLPAAAPPAAQELPPLFEPPGLGSLEPLDPDQPGVIVVGPWRRGHGGRFVAALQ
QLNRRTGWPILADASSGLRGLPLPLVSGYDLLLAEPQRLPPAHQVLRLGSMPASRRLQQW
LQTFEGPQLVITEAEPRRQDPLASGCAQHPHGLAAWVELLPTGEPSATSRADAARWQQAE
SLLQQQLDHDLPLQGPCSEPALARALQNLIPSEWPVMLASSSPVRDWESFAGRQSGHRTI
VSFRGASGIDGTLSLAAGIAQQWQRLVLVTGDLALLHDANGWLWRRQLSGELRLVVIDNG
GGGVFEQLPIPRQSMDFDRLFAMPQSCDAMALAAAHGVAARDCSAMETLAADLQWLLEPG
DAMRLLRCSTDRSRDAQLRQQLRDKPWWEQTPAP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
ttgagcatcgaggctgctgagaatctccgcgccgctgaagccctgctgtcggctttgatg
gggttggggctccaacgggttgtgctgtgcccaggaagccgcagcggtccgttggccctg
gccgcctcgcgcttggaatcccatggcctggcgctgacaacaggcattgatgagcgctca
gctggcttttttgccttgggccaaacccgcgccgatggccaacccaccgctgtgatcacc
acctctggaacggcggtggccaatctgttgccggcagcggtggaggctgatttcagcgct
ttgccgctgctcttgctcacggctgatcgccccgagcgactgaaggcctgcggcgccaat
caaacggtgaaccaggaggcctatttgcagccggcctgccgtgccctgcttcaagggccc
gctgcggggttgcatgacgccagtgatgagcgtttgctgcgcctagctcagtcggccatg
cgccacgccctcggtgcgcctgcagggccggtgcacctcaacctggcctttgatgagccg
ctgcatgccgatctcagcgggctgccagctgctgctccgccggcagcgcaagagctgccc
cccttgtttgagccgccagggctggggagcttggagcctttggatcccgatcagcccggg
gtgattgtggtgggcccttggcggcgcggccatggcggccgctttgttgccgcgttgcag
cagctcaaccggcgcacgggctggccgatcctggcggatgcctcctccgggcttcggggc
ctgcctttgccgctcgtcagcggttacgacctgctgctggctgagccgcagcggttgccg
ccagcccatcaggtgttgcgcttgggctcgatgcctgccagccgccgcctgcagcaatgg
ctgcagacctttgaagggccccagctcgtgatcaccgaagccgaaccgaggcggcaggac
cccttggccagtggttgcgcccagcatccccatgggttggctgcttgggtggaactgctg
cctacaggtgagccgtcggccaccagccgcgccgatgccgctcgctggcaacaagcggaa
tccttgctgcaacagcaactcgatcacgacctccccctgcagggcccctgcagcgaaccg
gccttggcccgggccctgcagaacctgattccttcggagtggccggtgatgttggccagc
agctcaccggtgagggattgggaaagctttgccgggcgccagagcggccaccgcacgatc
gtgagctttcggggcgcctcgggcattgatggcactctctcactggccgctgggatcgcg
cagcagtggcagcgactggtgctggtcaccggtgatttggccctgctgcatgacgccaac
ggttggctctggcgccgtcagctttctggagagctgcgccttgttgtgatcgacaacggc
ggcggtggcgtctttgagcagttgccaatccctaggcagtcgatggattttgatcgtctc
ttcgccatgccccagagctgtgatgccatggccctcgcggcagcacacggtgtggcggcc
cgtgactgcagtgccatggagaccttggccgccgatctgcagtggttgcttgagcctggt
gatgcgatgcgcctgctgcgatgctccaccgaccggtcccgtgatgcccagctgcgccag
cagttgcgtgacaagccatggtgggagcagacaccagctccttga
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